Gene Ssed_4374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4374 
Symbol 
ID5610470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5356576 
End bp5357103 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content43% 
IMG OID640935344 
Productferroxidase 
Protein accessionYP_001476104 
Protein GI157377504 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1528] Ferritin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0134844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCAC AAACAATGAT TGATCAATTA AACGCTCAAA TTAATGTTGA GTTTTTCTCT 
TCAAACCTTT ACCTGCAGAT GAGCGCATGG TGTGAAGACA AAGGTTTCGA AGGTGCGGCT
AAGTTTATGC GCGCCCATGC AGACGAAGAG ATGCAGCATA TGCATCGTCT GTTTACTTAT
GTTAGTGAAA CTGGCGGTAT GCCATTGCTT GGTGCAATCG AAGCACCACA GTCAGAGTTT
GCTTCTTTGT TGGCGTTATT TGAATACACC TATGAACATG AGCAGATGAT CACCAGTAAG
ATTAATGCAC TCGCTCATGC GGCTTTCACT AATCAAGATT ACTCTACGTT TAACTTCCTT
CAGTGGTATG TCTCTGAGCA GCATGAAGAG GAGAAGTTGT TTAAGTCAAT TGTCGATAAG
ATCCGTTTAG TCGGTGAAGA TGGCAAAGCC CTGTTCTTCG TCGATAAAGA TCTGGCGCAG
ATGGCTATCG AAGAGTCTGC CAGTGTTATG ACTTCTGCGG GTGAATAA
 
Protein sequence
MLAQTMIDQL NAQINVEFFS SNLYLQMSAW CEDKGFEGAA KFMRAHADEE MQHMHRLFTY 
VSETGGMPLL GAIEAPQSEF ASLLALFEYT YEHEQMITSK INALAHAAFT NQDYSTFNFL
QWYVSEQHEE EKLFKSIVDK IRLVGEDGKA LFFVDKDLAQ MAIEESASVM TSAGE