Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4374 |
Symbol | |
ID | 5610470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 5356576 |
End bp | 5357103 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640935344 |
Product | ferroxidase |
Protein accession | YP_001476104 |
Protein GI | 157377504 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1528] Ferritin-like protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0134844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGCAC AAACAATGAT TGATCAATTA AACGCTCAAA TTAATGTTGA GTTTTTCTCT TCAAACCTTT ACCTGCAGAT GAGCGCATGG TGTGAAGACA AAGGTTTCGA AGGTGCGGCT AAGTTTATGC GCGCCCATGC AGACGAAGAG ATGCAGCATA TGCATCGTCT GTTTACTTAT GTTAGTGAAA CTGGCGGTAT GCCATTGCTT GGTGCAATCG AAGCACCACA GTCAGAGTTT GCTTCTTTGT TGGCGTTATT TGAATACACC TATGAACATG AGCAGATGAT CACCAGTAAG ATTAATGCAC TCGCTCATGC GGCTTTCACT AATCAAGATT ACTCTACGTT TAACTTCCTT CAGTGGTATG TCTCTGAGCA GCATGAAGAG GAGAAGTTGT TTAAGTCAAT TGTCGATAAG ATCCGTTTAG TCGGTGAAGA TGGCAAAGCC CTGTTCTTCG TCGATAAAGA TCTGGCGCAG ATGGCTATCG AAGAGTCTGC CAGTGTTATG ACTTCTGCGG GTGAATAA
|
Protein sequence | MLAQTMIDQL NAQINVEFFS SNLYLQMSAW CEDKGFEGAA KFMRAHADEE MQHMHRLFTY VSETGGMPLL GAIEAPQSEF ASLLALFEYT YEHEQMITSK INALAHAAFT NQDYSTFNFL QWYVSEQHEE EKLFKSIVDK IRLVGEDGKA LFFVDKDLAQ MAIEESASVM TSAGE
|
| |