Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4315 |
Symbol | rplW |
ID | 5609842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 5282949 |
End bp | 5283248 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640935278 |
Product | 50S ribosomal protein L23 |
Protein accession | YP_001476047 |
Protein GI | 157377447 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0089] Ribosomal protein L23 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000209174 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000539649 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGATCAGTC AAGAACGTTT GCTAAAAGTT ATTCTTGCAC CACATATCTC TGAAAAGAGT ACTGTTTGTG CAGAAAATGA CAACACGGTA GTTTTCCGTG TAGCTATCGA CGCAACTAAA GCTGAAGTTA AGGCTGCAGT CGCTCAATTG TTCGAAGTTG AAGTTGATTC AGTTCGCACT CTAGTTAACA AAGGTAAGAC CAAGCGTACC GGTGCCCGTA TGGGTCGTCG TGTAGATTGG AAAAAAGCCT ACGTGACTCT AGCTGACGGC GCTGAAATCG ATTTCGTCGG CGCTGAGTAA
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Protein sequence | MISQERLLKV ILAPHISEKS TVCAENDNTV VFRVAIDATK AEVKAAVAQL FEVEVDSVRT LVNKGKTKRT GARMGRRVDW KKAYVTLADG AEIDFVGAE
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