Gene Ssed_4315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4315 
SymbolrplW 
ID5609842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5282949 
End bp5283248 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content45% 
IMG OID640935278 
Product50S ribosomal protein L23 
Protein accessionYP_001476047 
Protein GI157377447 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000209174 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000539649 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATCAGTC AAGAACGTTT GCTAAAAGTT ATTCTTGCAC CACATATCTC TGAAAAGAGT 
ACTGTTTGTG CAGAAAATGA CAACACGGTA GTTTTCCGTG TAGCTATCGA CGCAACTAAA
GCTGAAGTTA AGGCTGCAGT CGCTCAATTG TTCGAAGTTG AAGTTGATTC AGTTCGCACT
CTAGTTAACA AAGGTAAGAC CAAGCGTACC GGTGCCCGTA TGGGTCGTCG TGTAGATTGG
AAAAAAGCCT ACGTGACTCT AGCTGACGGC GCTGAAATCG ATTTCGTCGG CGCTGAGTAA
 
Protein sequence
MISQERLLKV ILAPHISEKS TVCAENDNTV VFRVAIDATK AEVKAAVAQL FEVEVDSVRT 
LVNKGKTKRT GARMGRRVDW KKAYVTLADG AEIDFVGAE