| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4312 |
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| Symbol | rplV |
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| ID | 5613488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5281467 |
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| End bp | 5281799 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640935275 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001476044 |
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| Protein GI | 157377444 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000184145 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000444445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGAAGTTT TAGCTAAACA TCGTTTTGCC CGTACGTCGC CTCAAAAGTG TCGTTTGGTT
GCAGATCAAA TCCGTGGACT GCCTGTTGCT AAGGCTCTCG AAATTTTAAC TTTCAGCCCT
AAAAAAGCTG CAGTACTTGT TAAAAAAGTA CTGGACTCTG CAATCGCTAA TGCTGAGCAC
AATGAAGGTG CTGACATTGA CGAGCTAAGA GTTGGAGCCA TTATGATCGA TGAAGGTCCA
ACTATGAAAC GTATCATGCC ACGTGCCAAA GGCCGTGCTG ATCGTATAAT TAAGCGTACC
AGCCACATTA CTGTGGTTGT ATCAGATCGC TAG
|
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| Protein sequence | MEVLAKHRFA RTSPQKCRLV ADQIRGLPVA KALEILTFSP KKAAVLVKKV LDSAIANAEH
NEGADIDELR VGAIMIDEGP TMKRIMPRAK GRADRIIKRT SHITVVVSDR
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