| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4310 |
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| Symbol | rplP |
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| ID | 5613486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5280346 |
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| End bp | 5280756 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935273 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_001476042 |
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| Protein GI | 157377442 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000402503 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000462981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGCTGCAAC CAAAACGAAC TAAATTTCGC AAAATGTTCA AAGGCCGCAA CCGTGGTCTA
GCGAACGGCA CTGAAGTAAG CTTCGGTGAT TTCGGTTTGA AAGCTGTTGG ACGTGGTCGT
CTAACTGCTC GTCAAATTGA AGCTGCGCGT CGTGCTATGA CACGTCACAT TAAACGTCAA
GGTCAAATCT GGATCCGCGT TTTCCCTGAT AAGCCTATCA CCTCTAAGCC TCTTGAAGTG
CGTATGGGTA AAGGTAAGGG TAACGTTGAA TATTGGGTTT GCCAAATTCA GCCAGGTAAG
GTTCTTTATG AGATGGATGG TGTAACAGAG GAGCTAGCTC GTGAAGCTTT CGCTCTTGCT
GCCGCTAAGC TGCCTCTTAA GACCACCTTT GTAACTAAGA CGGTGATGTA A
|
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| Protein sequence | MLQPKRTKFR KMFKGRNRGL ANGTEVSFGD FGLKAVGRGR LTARQIEAAR RAMTRHIKRQ
GQIWIRVFPD KPITSKPLEV RMGKGKGNVE YWVCQIQPGK VLYEMDGVTE ELAREAFALA
AAKLPLKTTF VTKTVM
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