| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4308 |
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| Symbol | rpsQ |
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| ID | 5613335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5279907 |
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| End bp | 5280155 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640935271 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_001476040 |
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| Protein GI | 157377440 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000115651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000430661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGTCTGATA ATATCCGTAC TTTGCAGGGT CGTGTACTTA GCAACAAGAT GGACAAGTCT
ATCACTGTAG CTATTGAGCG TAAGGTTAAG CATCCTTTAT ACGGGAAGTA CCTTAAGCGC
ACTACTAAGA TCCATGCACA TGACGAACAA AATCAGTGTA ATGCTGGCGA TGTCGTGACT
ATTCGCGAAT GCCGTCCGCT GTCTAAGACT AAGTCTTGGA CTCTGGTTGA AGTAGTATCT
AAAGCCTAA
|
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| Protein sequence | MSDNIRTLQG RVLSNKMDKS ITVAIERKVK HPLYGKYLKR TTKIHAHDEQ NQCNAGDVVT
IRECRPLSKT KSWTLVEVVS KA
|
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| |