Gene Ssed_4303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4303 
SymbolrpsH 
ID5611506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5277752 
End bp5278144 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content44% 
IMG OID640935266 
Product30S ribosomal protein S8 
Protein accessionYP_001476035 
Protein GI157377435 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.2409e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.62401e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCATGC AAGATCCTAT AGCGGATATG TTAACACGTA TTCGTAATGG CCAAGCTGCT 
AACAAAGTAT CAGTATCTAT GCCTTCTGCT AAGCTAAAAG TCGCTATTGC GAAAACGCTT
AAAGAAGAAG GTTATATCAC TGACTACGCC GTAGCAGATG AAACCAAACC TGTTCTTGAA
ATTACGTTAA AGTATTTCCA AGGCCAGCCA GTTGTTGAGA CTATCCAACG CGTTAGCCGT
CCTGGACTTC GTATTTACAA AAGTAAAGAC GAACTTCCAA AGGTTATGGG CGGACTGGGT
GTCGCAATTG TGTCCACTTC TAAAGGTTTG ATGACTGATC GCACTGCCCG CCAAAATGGC
ATGGGCGGGG AAGTTATCTG CTACGTAGCA TAA
 
Protein sequence
MSMQDPIADM LTRIRNGQAA NKVSVSMPSA KLKVAIAKTL KEEGYITDYA VADETKPVLE 
ITLKYFQGQP VVETIQRVSR PGLRIYKSKD ELPKVMGGLG VAIVSTSKGL MTDRTARQNG
MGGEVICYVA