| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4226 |
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| Symbol | |
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| ID | 5611637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5191179 |
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| End bp | 5192018 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935185 |
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| Product | carboxylesterase |
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| Protein accession | YP_001475958 |
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| Protein GI | 157377358 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0627] Predicted esterase |
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| TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0152295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTG AGAGTATTAG TGTCAATAAG AGCTTTGGTG GTTGGCATAA ACAGTATAGT
CATCACTCCA AAACGTTAAA TTGTGGCATG CGATTCGCTA TCTATCTGCC GCCACAAGCA
TCGAATGGCA AGAAGGTCCC GGTTCTATAC TGGCTTTCGG GCTTAACCTG TACCGATGAA
AACTTTATGC AGAAAGCGGG TGTACAAGCA CTGGCCGCCG AGCTTGGCAT CGCTATCGTC
GCACCGGATA CCAGCCCCAG AGGTGATGAT GTCGCCGATG ATGAAGGTTA TGATCTTGGT
AAGGGAGCGG GCTTTTATGT CAATGCGACG CAGGCACCGT GGAATCGCCA TTACCATATG
TACGATTACG TCGTCGATGA GTTGCCAAAA CTGATTGAAT CTATGTTCCC TGTCAGTGAT
AAACGCTCTA TCGCAGGGCA CTCAATGGGC GGGCACGGTG CGTTAGTTAT CGCGCTGCGT
AACTCAGATG CATACCAGTC AGTATCGGCC TTTAGCCCGA TCAGTAATCC GATTAACTGC
CCCTGGGGTA AGAAGGCGCT GACAGCCTAT CTGGGCCGGG ATTCGGCGAC ATGGACAGAG
TATGACTCCA GCGCCTTGAT GCGTCAGGCG ACTAAATTTG TACCGGCTCT GGTAGACCAG
GGTGACGCCG ATGACTTTCT TGTTGAGCAG TTGAAGCCCG AAGTGCTCGA AGCTGCAGCT
AAGGTTAACG GTTACCCGCT AGAGCTTAAT TATCGTGAAG GTTATGACCA TAGTTACTAT
TTTATCTCCA GCTTTATCGA AAACCACCTG CGTTTTCATG CCGAGCATCT GGGTAACTAA
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| Protein sequence | MTVESISVNK SFGGWHKQYS HHSKTLNCGM RFAIYLPPQA SNGKKVPVLY WLSGLTCTDE
NFMQKAGVQA LAAELGIAIV APDTSPRGDD VADDEGYDLG KGAGFYVNAT QAPWNRHYHM
YDYVVDELPK LIESMFPVSD KRSIAGHSMG GHGALVIALR NSDAYQSVSA FSPISNPINC
PWGKKALTAY LGRDSATWTE YDSSALMRQA TKFVPALVDQ GDADDFLVEQ LKPEVLEAAA
KVNGYPLELN YREGYDHSYY FISSFIENHL RFHAEHLGN
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