| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4218 |
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| Symbol | |
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| ID | 5611791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5181775 |
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| End bp | 5184099 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935177 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475950 |
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| Protein GI | 157377350 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTTG AATCCACATT ATTTACTTAC CCTAAGCATC GCTCTGAGCT GAAGCGTCCA
GCTCCTTTTT TACCTATGTC TCGTAAAGAG ATGGATAAGC TGGGTTGGGA CCGTTGCGAC
ATCATCATAG TGACAGGTGA CGCTTACGTG GATCATCCAA GCTTCGGTAT GGCGATCATT
GGACGTATGT TGGAAGCTCA GGGTTTTAGG GTGGGGATCA TCGCTCAGCC GGATTGGTCT
AACAAGAATG ACTTTATGAA GCTGGGTAAA CCCAACCTCT ATTTTGGTGT CACCGCCGGC
AATATGGATT CGATGATCAA TCGTTACACT GCCGAGCGTC GTATGCGCCA TGATGATGCC
TATACCGCCG GTGACGTTGG TGGAAAGCGC CCCGACCGCG CCGTGACCGT CTATACCCAG
AGGTGTAAAG AAGCATTCAA ACAGGTTCCC GTGATAATCG GTGGCATAGA GGCTAGTCTT
CGCCGTACCG CTCACTACGA TTATTGGTCC GATAAAGTAC GTCGCTCAGT TATATTGGAT
GCCAAAGCTG ACATTCTGGT TTACGGCAAT GCCGAGCGCC CTTTGGTTGA GCTTTCCCAT
CGTCTTGCCG GCGGTGAGCC TATTTCTGAA CTGCATGATA TTCGTGGTAC TGCGGTTATT
CGTAAAGCAC CCTTACCAGG CTGGAAGGGG GTAGATTCGC GCAAAATAGA TCAACTTCAT
AAGATCGACC CAATCCCGAA TCCCTATGGT GCCGATGATG TCGGCTGCAA GAACCTGTCG
GGCCCAACGG ATGAGAAGAT ATTCGATAAC GATGCCCCTA AGGCTATCAG TGTGCAGCCA
CCCAAACCTA AGCCTTGGGA GAAGAGTTAT ATACAACTTC CAAGTTATGA AAAAGTGGCG
GCAGACAAAT TTCTCTATGC TCATGCATCC CGAATTTTGC ACCAAGAGCA GAATCCTGGC
TGCGCCAGAG CGCTGTTTCA GGTTCATGCG GAGCGCGCTG TCTGGGTCAA TCCACCTGCG
TTACCGTTAA ATACCGATGA GATGGATGGA GTGTTTGATC TGGCGTATCA GCGTGTTCCC
CATCCTTCAT ATGGTAAAGA GAATATACCT GCCTATGACA TGATTAAGAC CTCTATCAAC
ATCATGCGTG GTTGTTTCGG TGGCTGCTCA TTCTGCTCTA TTACCGAGCA TGAAGGGCGG
ATTATTCAGA GCCGTTCACA AGAGTCGATT GTGAACGAGA TCAAAGACAT TCAGGGTAAA
GTTCCTGGTT TTACCGGGGT GATCTCAGAT CTTGGTGGAC CGACGGCCAA CATGTATCAC
TTAGGCTGTA AGAGTGAGAA GGCTGAACAA ACCTGTCGCC GACTCTCCTG CATCTTCCCC
GATATTTGTG GCCATATGGA TACCGACCAT CAACCTACTA TAGACCTGTA TCGGGCTGCT
CGAGATCTGC CCGGCATTAA GAAAATTTTG ATTGCCTCGG GTGTACGATA TGATCTGGCA
TCCGAAGACC CTCGTTATGT CAAAGAGCTG GCAACCCATC ATGTCGGCGG CTATCTCAAG
ATTGCCCCGG AGCATACCGA GAAAGGGCCG CTCGATATGA TGATGAAGCC GGGAATGGGC
AGCTATGATA GATTTAAAGA GCTGTTCGAT AAATATTCGA AAGAGGCGGG TAAGAAGCAG
TACCTTATCC CGTACTTTAT CTCGGCTCAC CCGGGGACGA CCAATGAAGA TATGGTGAAT
CTGGCGCTAT GGCTGAAAGG TGAGAAATTC AAGCTGGATC AGGTGCAGAA CTTTTATCCA
TCGCCCATGG CGAACGCGAC GACTATCTAT CATACCGAGC TGAATTCACT GAAAAATGTG
AAGCACACCA GCGAGCAGAT CGCGGTGCCT AAAGGTGGAC GTCAACGTAA ACTGCACAAA
GCCCTGCTGC GCTATCATGA TCCTGTCGGC TGGCCGATGA TCCGTGAGGC GCTGATTGAG
ATGGGCAAAG AGAAGCTTAT CGGTAACGGC CCTAACTGTT TAGTGCCGGC AGAGTCCCGC
CAAGAGCGTG AAGCGAACCG TAGTAAAGGT AAAGGCGGTG GTGCGGGCAA AGGGGCGAGT
ACGAATAAAG AGCAAGGGGG CAAGAAAGCC TTTACCCGCT TCTCTGAAGA TCAGTTTGCC
GATCGCAAAC CTAAAGGCAA AGGGAGCGCA GAAGTTAAGG GCAAAAGTGA CTCATCTGCT
AAGCAGGGCT CTGGGAAGAC TGGTGGACAG GCTGATAAAT CGGGTTCACG CAAGCGTCCG
GCAAAGAAAA ATGCTTGGGG AACCACGCCT AAGCACCAAA GATAG
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| Protein sequence | MQVESTLFTY PKHRSELKRP APFLPMSRKE MDKLGWDRCD IIIVTGDAYV DHPSFGMAII
GRMLEAQGFR VGIIAQPDWS NKNDFMKLGK PNLYFGVTAG NMDSMINRYT AERRMRHDDA
YTAGDVGGKR PDRAVTVYTQ RCKEAFKQVP VIIGGIEASL RRTAHYDYWS DKVRRSVILD
AKADILVYGN AERPLVELSH RLAGGEPISE LHDIRGTAVI RKAPLPGWKG VDSRKIDQLH
KIDPIPNPYG ADDVGCKNLS GPTDEKIFDN DAPKAISVQP PKPKPWEKSY IQLPSYEKVA
ADKFLYAHAS RILHQEQNPG CARALFQVHA ERAVWVNPPA LPLNTDEMDG VFDLAYQRVP
HPSYGKENIP AYDMIKTSIN IMRGCFGGCS FCSITEHEGR IIQSRSQESI VNEIKDIQGK
VPGFTGVISD LGGPTANMYH LGCKSEKAEQ TCRRLSCIFP DICGHMDTDH QPTIDLYRAA
RDLPGIKKIL IASGVRYDLA SEDPRYVKEL ATHHVGGYLK IAPEHTEKGP LDMMMKPGMG
SYDRFKELFD KYSKEAGKKQ YLIPYFISAH PGTTNEDMVN LALWLKGEKF KLDQVQNFYP
SPMANATTIY HTELNSLKNV KHTSEQIAVP KGGRQRKLHK ALLRYHDPVG WPMIREALIE
MGKEKLIGNG PNCLVPAESR QEREANRSKG KGGGAGKGAS TNKEQGGKKA FTRFSEDQFA
DRKPKGKGSA EVKGKSDSSA KQGSGKTGGQ ADKSGSRKRP AKKNAWGTTP KHQR
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