| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4194 |
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| Symbol | |
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| ID | 5612116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5153209 |
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| End bp | 5154213 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935153 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_001475926 |
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| Protein GI | 157377326 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0129654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAG TTAATCAAGG TTCAGGTTTT CACTTTAGGG CGTTAACCCC AGACCTGATC
TTAGATGCGA TTGAGAGTCT GGGTGTATAC CCGGAAACGG GTTTATTGGC GCTTAATAGT
TATGAGAACC GTGTCTACCA GTTTCGATGT GATAACGGTG TTCGTTATGT GGTTAAGTTC
TACCGTCCAG AGCGCTGGAG CGATGAGCAG ATCCAGGAGG AGCATGACTT TTCACAGTCG
TTAGTCGATG AGGAGATCCC CATCGCGACG CCGATGATTA TCGATGGGCG TTCACTGCAC
CATTATCAGG GATTCAGATT CGCGCTGTTT CCATCGATAG GTGGTCGATC ATTTGAGGTG
GATAATCTGG AGCAGTTAGA GGCGACCGGA CGTTTCATCG GCCGTATTCA TCAATTTTCA
CAGCAGGCAA AGTTTGAACA TAGAGTCGTG GTTAATCCAC AAATGCTGGG TGACGAATCC
TTGCTCTGGC TTAAGGAGTC TGGCCATGTC CCTCAATCGC TGGTCGTCCC CTATTTCACT
ATCGTGGAAC AGGTATTAGA AAAGTCCAAA GAGATCTGGT TTAAGCAGCC CCATAAACAG
ATCCGACTCC ATGGTGACCT TCACCCCAGT AATATCTTGT GGACGCCGGA TGGTCCGGGA
TTTGTCGATC TCGATGATGC GCGTACCGGT CCGGCAGTTC AGGACCTATG GATGATGTTA
ACCGGCGATC GGTCACAGCG ATTACTTCAG CTCGAGATCT TACTCGAAGC CTATGAAGAG
TTTTGTGAAT TTGATACCCG TGAATTAACC CTTATCGAGC CTTTAAGGGC GATGAGGATG
CTGCATTATA ATGCCTGGCT GAGTCGAAGG TGGGATGACC CCGCCTTCCC GATGAACTTT
CCCTGGTATG CGGAAGAGAA GTATTGGGAG CAGCAGATCC TCTCTTTTAA AGAGCAACTA
GCCGTGCTCG ATGAGCCGGT GTTGAGTCTG ATACCCAATT ACTAA
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| Protein sequence | MSQVNQGSGF HFRALTPDLI LDAIESLGVY PETGLLALNS YENRVYQFRC DNGVRYVVKF
YRPERWSDEQ IQEEHDFSQS LVDEEIPIAT PMIIDGRSLH HYQGFRFALF PSIGGRSFEV
DNLEQLEATG RFIGRIHQFS QQAKFEHRVV VNPQMLGDES LLWLKESGHV PQSLVVPYFT
IVEQVLEKSK EIWFKQPHKQ IRLHGDLHPS NILWTPDGPG FVDLDDARTG PAVQDLWMML
TGDRSQRLLQ LEILLEAYEE FCEFDTRELT LIEPLRAMRM LHYNAWLSRR WDDPAFPMNF
PWYAEEKYWE QQILSFKEQL AVLDEPVLSL IPNY
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