| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4193 |
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| Symbol | |
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| ID | 5612115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5152460 |
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| End bp | 5153071 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640935152 |
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| Product | DsbA oxidoreductase |
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| Protein accession | YP_001475925 |
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| Protein GI | 157377325 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000377702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.608674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAG CATTACTTAT TGCCGTTGCT ATGTTGATAG CCCCCATTGC TGCCATTGCA
GCCGATTACA AGGAGGGTGT TCATTACACC GTAATCAACC AAGGCCCGGC GACGGCTAAG
CCTGAAATTG CCGAGTTTTT CTCCTTCTAC TGTGGCCACT GTTACAACTT TTCTAAGACT
GAAGTGCCAA AGATCAAAGC GAATAAGCCT GAAGGTGTCA CGTTTAAGCA GAACCATGTC
GAGTTTATCG GTAAAGAGAT GGGTATCGAG ATGTCACGTG CCTTCGCCGT TGCTCATCAG
CTGAAAGTCG ATGCAAAAAT AGAGCATGCA CTGTTCACCG CAATACATGA TAAGAAACAA
CACTTCACCA ATCGTGACGA CATTCGTAAG CTGTTTATCG CCAATGGCGT AGATGGTAAA
GATTTCGATG CCGCCGCGAA CTCGTTCATG GTGAGTGCTC AAATGTCACA GATGAAGCGC
GCAACATCAA ATGCTCAAAT CTCTGGTGTA CCGGCCTTAG TGGTTAATGG TAAATACCGT
GTAGAGACCG GCGCTATCAA ATCTTATGAC GAGCTTCTCG ATATCGCCTA CTACCTGACT
TCGATGAAGT AA
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| Protein sequence | MKKALLIAVA MLIAPIAAIA ADYKEGVHYT VINQGPATAK PEIAEFFSFY CGHCYNFSKT
EVPKIKANKP EGVTFKQNHV EFIGKEMGIE MSRAFAVAHQ LKVDAKIEHA LFTAIHDKKQ
HFTNRDDIRK LFIANGVDGK DFDAAANSFM VSAQMSQMKR ATSNAQISGV PALVVNGKYR
VETGAIKSYD ELLDIAYYLT SMK
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