| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4134 |
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| Symbol | |
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| ID | 5613190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5053183 |
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| End bp | 5053917 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935089 |
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| Product | uroporphyrinogen III synthase HEM4 |
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| Protein accession | YP_001475866 |
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| Protein GI | 157377266 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAC TTCTGACGCG CCCACAAGGG CGTAATCAGT CGATGATAGA GGCCCTGAAT
GAAAAAGGGG TCTCTCATGT CGTCACGCCA TTATTGAATG TTCAAGCAAC TGATATTCAG
CTGCACCAAT CATCTATCGA ACAATTTAAC CAAGCTGATA TTGTGATTTT TATCAGCACT
AATGCGGTAA AATTCGCTTC TAAAGCATTA AATAACCAAT TTCCAGACTC TGCACAGTTT
TATGCCGTTG GAGAAGCAAC CTATCAGGCT CTCCTAGCCC TTGGGATCTC TTCCCAAAAA
GCGCCACAGG AATGCCAACA GACCGAAGGG TTACTCACTC TCGAACAGCT TCATCATATT
TCAAATAAGA ACATTGTGAT CGTACGGGGC GTCGGAGGAA GAGAGGCACT GGCCGAGGCA
CTAACCTCTC GGGGGGCCAT CGTCAACTAT TGGGAGGCCT ATCAAAGGGG TTGCCCACAG
CTAGACAAAA ACAGTGTTAT TCAGGGGTGG CAGAACGCTG AAATAGACAC GATTGTCGTC
ACCAGTGGCG AAATACTTAA TAATCTAATC AAACTTGTAC CAAAAGAGCT ATTTGCTTGG
CTGCGTGCAT GTCATATTAT AGTCCCTAGC TCTCGAGTTC AGGAACAAGC CTTAGCCAAC
GGATTACAAC ACGTTACTAA TGCCAAAGCT GCAAACTGCA AGGCCGTACT ATCAGCCTTA
AAGTTATCTA TCTAG
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| Protein sequence | MKVLLTRPQG RNQSMIEALN EKGVSHVVTP LLNVQATDIQ LHQSSIEQFN QADIVIFIST
NAVKFASKAL NNQFPDSAQF YAVGEATYQA LLALGISSQK APQECQQTEG LLTLEQLHHI
SNKNIVIVRG VGGREALAEA LTSRGAIVNY WEAYQRGCPQ LDKNSVIQGW QNAEIDTIVV
TSGEILNNLI KLVPKELFAW LRACHIIVPS SRVQEQALAN GLQHVTNAKA ANCKAVLSAL
KLSI
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