| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4123 |
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| Symbol | |
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| ID | 5613454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5041796 |
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| End bp | 5042365 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935078 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475855 |
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| Protein GI | 157377255 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.39248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGGTA AAGTAACGCG CCAACGTTTT TCCAAGAATC AATGGTTGGA GGCTGGGTTA
AAAATGCTAT CAAACCAAGG TGTTGATAAG CTAAGCATAG GTAATTTGTC TCGCACTGTC
GGTGTCGCCA AGACCAGCTT CTACTGGCAC TTTAAAGACA GACAAGATCT ACTCGATCAT
ATGCTGGAGT ACTGGGTATC TGAATTTAAC GCTGTGTTAA CGGACAACCC GGATCTGCCA
CAACTTCCGC CTAAACAGCG ACTGCAAGCC ATCGCCGATA CTGTAGTCGG ACAAGATCTA
GCCAAATATG AGTTAGCCAT CCGCGGCTGG GCCAGCCACG ACGAGGCAGC CATGGCGGTG
TTCGACAATA TTCACTCACG CCGAATGGCC GTGATTCAAC GGGCCTTTGC CGACGCCGCT
TTCGATGAGC AGGAGCAGAA GACCCGTGCA GAACTCTTTA ACTGTTACCT GAACTGGGGC
AAGGTGATGA ACAACGACCC CCTATCATTT AAGACAACGG TAAACAGACT TATCCCTATG
CTGCTTCAAG CGCCAGCTGA AGCAGATTAA
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| Protein sequence | MTGKVTRQRF SKNQWLEAGL KMLSNQGVDK LSIGNLSRTV GVAKTSFYWH FKDRQDLLDH
MLEYWVSEFN AVLTDNPDLP QLPPKQRLQA IADTVVGQDL AKYELAIRGW ASHDEAAMAV
FDNIHSRRMA VIQRAFADAA FDEQEQKTRA ELFNCYLNWG KVMNNDPLSF KTTVNRLIPM
LLQAPAEAD
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