| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4108 |
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| Symbol | |
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| ID | 5612079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5025274 |
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| End bp | 5026191 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935063 |
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| Product | guanosine-5'-triphosphate,3'-diphosphate diphosphatase |
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| Protein accession | YP_001475840 |
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| Protein GI | 157377240 |
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| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0248] Exopolyphosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000620786 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000265887 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAAATA CTCCTCCATA CGCAGCGATT ACGTTAGGTT CGAATAGTTT CAACATGTTG
GTTGCCAAGA CACTTGGTGG CCAACCTGAA ATTATTGCTA AATATAAACG CAAAGTCAGA
CTGGCCGAAG GAATTCAAGG CGATGGTACC TTAAGTGAAG AGGTGCTGAA CCGAGGATTG
GATTGCTTGG CTATGTTTGC AAAAATGCTG AAGGAGGAGG GTGTTGCCCC TGATAATGTT
GCCGTTATTG CAACTGCAAC ACTCAGACAT ATCGGCAACT CGGATGATTT TTGCCAACGC
GCCTTACCCA TTCTTGGTCA CCCTATTGAG ATCATCTCAG GTATGCAGGA AGCCGAGTTT
ATCTATCAAG GTATGGTTGC GACTACGTGT GCGGAAGGTC GTCGACTGGT GATCGATATC
GGGGGCGCTA GCACCGAATT TATTATCGGT GACGATGATA AGGTTTTGCT TAAAACCAGT
CTCTCTATGG GATGCGTGAC TTTCAATGAA CGCTTCTTTA ACTCCTTTCC ATTCCAACAG
TTAGATTTCG ACGATGCCGA GTCGCAAGTT AAAGCCGTTT TGGGGCAATA TTTAACTGAA
CTGAAGGCTT TAGGTTGGCA TTGTGTTGTC GGAGCTTCCG GCAGTGTGCA ATCTGTGGTT
GAGTTACTGA ATCATCGCAA TGAATCAGCA AGTATCACTC CTGCTGTGCT CAACACTCTG
AAGCAAGAGA TCTTAGAGCA AGAAGATATC TCGATGCGGG ACATTAGCGG ATTACACCCA
GAAAGAGCAC CGACTTTTGC CGCCGGCATA TCCATACTAC TGGCCCTGTT CGAGCTTCTT
GAAATTGAAA AGCTTAACCT TTCTGGCGGC GCGCTTAGAG AAGGGGTGCT ACAGAGGTTG
GCAAACCGAA TCAAGTAG
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| Protein sequence | MSNTPPYAAI TLGSNSFNML VAKTLGGQPE IIAKYKRKVR LAEGIQGDGT LSEEVLNRGL
DCLAMFAKML KEEGVAPDNV AVIATATLRH IGNSDDFCQR ALPILGHPIE IISGMQEAEF
IYQGMVATTC AEGRRLVIDI GGASTEFIIG DDDKVLLKTS LSMGCVTFNE RFFNSFPFQQ
LDFDDAESQV KAVLGQYLTE LKALGWHCVV GASGSVQSVV ELLNHRNESA SITPAVLNTL
KQEILEQEDI SMRDISGLHP ERAPTFAAGI SILLALFELL EIEKLNLSGG ALREGVLQRL
ANRIK
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