| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4057 |
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| Symbol | |
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| ID | 5609775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4967543 |
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| End bp | 4968262 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640935012 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001475789 |
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| Protein GI | 157377189 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAC TTATTGTAAT TACGGGTGCA TCTTCGGGTA TCGGCGCGGC AATGGCGAAG
GCATTTAGCG CCAAGGGTCA CCCACTCTTA CTGCTGGCTC GCCGCATCGA GCCTATGCAG
GCGCTTGAAC TTGAAAACAG CTTATGCATC AGCGTCGATG TCACCGATGG TGAAGCGATT
AAAACGGCTA TCGCGACGGC CGTTGAAAAG TTTGGCCCGG TTGGCGGCCT GATTAACAAT
GCTGGCGTGA TGCTACTCGG TCAGGCGGAC ACTCAAAATC CTGCCGAGTG GGCTCAGATG
CTTAACATCA ATGTTATGGG AGTACTCAAC GGAATTCATG CTGTATTGGC CGATATGAAA
GCCCGCAAGA CTGGCACCAT CATCAATGTC AGCTCGGTTG CAGGCCGTAA AACCTTCCCA
AACCATGCAG CATACTGCGC CACTAAATTC GCGGTACACG CACTGACAGA AAATATCCGT
GAAGAAGTTG CCATGGATGA CGTACGTCTG GTCACTATTG CGCCTGGCGC CGTAGAAACT
GAGCTACTCG GTCATACCAC CAGCGATGAG ATAAAAGCTG GCTACGCAGA TTGGAAAGAG
TTCATGGGCG GTGTTGTTGC ACCGGAAACA ATTGCAGAAG CGGCTCTGTT CGCCTTCGAG
CAACCTCAAA GTGTCTGCGT ACGTGAAATC GTATTAGCGC CTACTCGTCA GCAACCTTAA
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| Protein sequence | MKQLIVITGA SSGIGAAMAK AFSAKGHPLL LLARRIEPMQ ALELENSLCI SVDVTDGEAI
KTAIATAVEK FGPVGGLINN AGVMLLGQAD TQNPAEWAQM LNINVMGVLN GIHAVLADMK
ARKTGTIINV SSVAGRKTFP NHAAYCATKF AVHALTENIR EEVAMDDVRL VTIAPGAVET
ELLGHTTSDE IKAGYADWKE FMGGVVAPET IAEAALFAFE QPQSVCVREI VLAPTRQQP
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