Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4025 |
Symbol | |
ID | 5613986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4930999 |
End bp | 4931694 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640934980 |
Product | single-strand binding protein |
Protein accession | YP_001475757 |
Protein GI | 157377157 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000941126 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000000110243 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCCAGTC GTGGTGTCAA TAAGGTAATT TTGGTCGGTA ACTTAGGGAA AGACCCTGAA GTTCGTTACA TGCCAAATGG CAATGCCGTA GCCAACTTTA CAGTGGCGAC GAGTGAGTCT TGGAAAGACC AACAAGGTCA GCCACAAGAG CGTACAGAGT GGCATAATAT CGTTATGTAT CGTCGCTTAG CAGAAATTGC AGGCGAGTAC CTTAAGAAAG GTTCTAAGGT ATATATCGAA GGTAAATTGC AAACCAGCAA GTGGCAGGAT CAGTCTACCG GTCAAGATCG CTACAAGACA GAGATCAATG CTAACGAAAT GCAGATGCTC GATAGCCGTG GTCAAGGTGG CGGACAGCAA GGTGGCTATG GTCAACAGCA GGGTCAGCAA CAGCAGAACC AGTACAATGC ACCTCAGCAG CAGGCTCCGC AGCAAGGTTA TGCACCTAAG CCGCAGCAAG CCCCTCAGCA GGCTCCACAG CAAGGTTATG CACCTAAGCC GCAGCAAGCA CAACAGCAAG CTCCTGCACA GCAATCAGCT TATGCGCCAA AGCCTCAGCA AGCACCACAG CAAGCACCAC AGCAAGCGGC TCCGCAACAG CGTCCAGCGC CTCAGCCTCA ACAGCCAGCG CAGCAGCCTC AGCAGAACTT CACTCCTGAC CTGGATGATG GTTGGGATGA TGATATCCCG TTTTAG
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Protein sequence | MASRGVNKVI LVGNLGKDPE VRYMPNGNAV ANFTVATSES WKDQQGQPQE RTEWHNIVMY RRLAEIAGEY LKKGSKVYIE GKLQTSKWQD QSTGQDRYKT EINANEMQML DSRGQGGGQQ GGYGQQQGQQ QQNQYNAPQQ QAPQQGYAPK PQQAPQQAPQ QGYAPKPQQA QQQAPAQQSA YAPKPQQAPQ QAPQQAAPQQ RPAPQPQQPA QQPQQNFTPD LDDGWDDDIP F
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