| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3959 |
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| Symbol | napH |
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| ID | 5613113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4839110 |
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| End bp | 4840018 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934913 |
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| Product | quinol dehydrogenase membrane component |
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| Protein accession | YP_001475691 |
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| Protein GI | 157377091 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0348] Polyferredoxin |
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| TIGRFAM ID | [TIGR02163] ferredoxin-type protein, NapH/MauN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.041404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAGAA GCACAGTGAA AAAAGAGGCT ATAACCGATG CAATGAACGA CTCCTCTAAA
GCAGGATTCG CTCAGGCGGC GATCGATGAA CTGGGATGGT GGCGTGCTCA CAAATTCCTG
TTTCTCAGAC GCGCCAGCCA GCTGAGTGTA TTAACCTTGT TTGCCATTGG CCCCTGGTTT
GGCTTATGGA TCCTGAAGGG AAACCTCTCG TCCAGCGAGT TACTCGGTAC TGTGCCATTG
TCGGATCCAC TTGTGACACT GCAAGTCTTG ATGACGGGAC ATATTCCTGA GTTAACCCTG
ATTCTCGGTG CCCTCTTTAT CACAGTGTTT TATGTGATAG CGGGTGGCCG GGTGTTCTGC
AGCTGGGTGT GCCCTGTCAA TCTGGTCACC GACAGTGCGA GTTGGTTAAG ACGTAAAATG
AATTTGCCTC GTTTAGGCGA GATGCCAAGA AATTTACGTT ACTACCTGCT GGGTCTGGTT
ATTGTGTTAC CTCTGCTGAC AGGCATCACC GTTTGGGAAT GGGTCAATCC GGTTCCGATA
CTCTACCGCG CCGTGTTATT CGGTGCCGGT AGCGGACTGT GGATCTTGTT GGCCATCTTC
CTGCTCGACC TGTTTATCAG CGAGCGTGGA TGGTGTGGGC ATCTGTGCCC CACTGGTGCT
ATGTTTGCCC TATTTGGCAA ATTGAGCCCG GTTAAAGTAT CGGCCGTTAA CGCCAAGGCC
TGTGATAACT GTATGGATTG TTTCGATGTT TGCCCCGAGA GACAGGTGCT AAAACCTGCG
CTTAAAGGGA AACAGATGAT GATAACCGAC AGTGATTGCA CTCAATGTGG CCGCTGTATC
GATGTCTGCG CCCAACGCGT TTTCCAGTAT CAAAATAGAA TTGCCCTAAA GGCGGAGAAC
AACCAATGA
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| Protein sequence | MIRSTVKKEA ITDAMNDSSK AGFAQAAIDE LGWWRAHKFL FLRRASQLSV LTLFAIGPWF
GLWILKGNLS SSELLGTVPL SDPLVTLQVL MTGHIPELTL ILGALFITVF YVIAGGRVFC
SWVCPVNLVT DSASWLRRKM NLPRLGEMPR NLRYYLLGLV IVLPLLTGIT VWEWVNPVPI
LYRAVLFGAG SGLWILLAIF LLDLFISERG WCGHLCPTGA MFALFGKLSP VKVSAVNAKA
CDNCMDCFDV CPERQVLKPA LKGKQMMITD SDCTQCGRCI DVCAQRVFQY QNRIALKAEN
NQ
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