| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3950 |
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| Symbol | |
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| ID | 5613861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4827736 |
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| End bp | 4828980 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934904 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001475682 |
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| Protein GI | 157377082 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.387419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTTC TATATTTAGT TCTTGTATTG TTGGTGACGA CTCGAATATT TGCCGTGATC
GCCAAACGCC TAAAACTACC GCCCATTGTT GGTGAATTGG TGTCGGGGAT AGCGCTTGGT
TATTTTCTTT ACCACTTTCA AGACGTGTTT CCACTGCTAT GGGAGGTAAC CCAAGGGGAA
GCATTTGAGG CCCTGGCCGA TCTCGGCATG TTTTTCCTGA TGCTATTAGC GGGTGTACGC
ATGAGCCCGC TGGACTTTAA GAAAACTTCC AGCTCGGCGC CTGCTGTAGC CTTTGGGGGC
ATGCTGGTGC CCATCATCTC CGGTACATTA ATAGGCTTGA TGTTCTTCCC TGAATCCCCC
TTTAAGATGG TTCAGAGCTG GTTTTTAGGC ACAGCCTTGG CGATCACAGC AGTACCGGTA
ACGATTCGTA TGCTGATGGA GTTTAACAAA CTGGATACGG CAGAGGGTAA AACCATTGTC
GCGGCAGCAC TTTGGGACGA TCTGTTAAGC CTGTTTATTC TGGCACTCCT GCTAGCCACC
ATAAACAATG GCGGCACTCT ATCTTTTACT CCGGATCTCT GGCTGCCATT GCTGGGCAAA
GTGATCCTCT TCTTCGCTAT CACCATACCT GTCGGACACT ACCTGTTCCC ACTTATCGGT
AGTCGCCTCA AGGCCACAGA AATTCCTGAC ATCGATTTCA GTATGCTGTT GATCGCCGCA
CTGGCATATG CGGTACTCGC AGAGATGCTG GATCTACACT TTATTATCGG CGCCTTTGTC
GCGGGCATGT TTTTTCACCC GGCTGTAGTA AAGCAGGAGA TTTATGATCG TGTAGATGAG
CAAACCTCCG GTATTACGTC CGGTTTCCTT GCGCCAATTT TTTTCGTGTC GATAGGCTTT
CATCTGGACT TAACCGCACT GGCATCGATA CCAGGGTTCG TCACTCTGCT CATCATAGTT
GCCTTACTAA GTAAGTTAGT CGGAGCCGGA GTATGTGCAC GGGCCACCGG CCATGATACT
CAAGAGTCGC TACGCATAGG AGTGGCAATG AGTGGCCGGG GAGCGGTTGA GATCGTTTTG
GCCGGCGTCG CCTTGCGAGC CGGATTATTC AACCATCCAG ACCCTACGCC ATCGATTATC
ACCGGATTGT TCTCAGCTAT CGTCATCATG GCGATAGTGA CCAGTATTGT GACACCGCTG
ATATTAGCCT TTTTGATCCG CTGGCAGGAG AGGAGTGGAC CATAA
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| Protein sequence | MRFLYLVLVL LVTTRIFAVI AKRLKLPPIV GELVSGIALG YFLYHFQDVF PLLWEVTQGE
AFEALADLGM FFLMLLAGVR MSPLDFKKTS SSAPAVAFGG MLVPIISGTL IGLMFFPESP
FKMVQSWFLG TALAITAVPV TIRMLMEFNK LDTAEGKTIV AAALWDDLLS LFILALLLAT
INNGGTLSFT PDLWLPLLGK VILFFAITIP VGHYLFPLIG SRLKATEIPD IDFSMLLIAA
LAYAVLAEML DLHFIIGAFV AGMFFHPAVV KQEIYDRVDE QTSGITSGFL APIFFVSIGF
HLDLTALASI PGFVTLLIIV ALLSKLVGAG VCARATGHDT QESLRIGVAM SGRGAVEIVL
AGVALRAGLF NHPDPTPSII TGLFSAIVIM AIVTSIVTPL ILAFLIRWQE RSGP
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