| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3926 |
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| Symbol | |
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| ID | 5612387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4796096 |
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| End bp | 4796887 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934880 |
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| Product | prolipoprotein diacylglyceryl transferase |
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| Protein accession | YP_001475658 |
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| Protein GI | 157377058 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0682] Prolipoprotein diacylglyceryltransferase |
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| TIGRFAM ID | [TIGR00544] prolipoprotein diacylglyceryl transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACCACT TTATTTGGAA TATCGATCCT GTATTAATCT CGTTTATGGG GCTAAAGGTA
CATTGGTATG GTGCGCTGTT TGCGACGGCC ATCGCATGTG GCTTTCAGGT GATGAAACGC
ATCTATATCA AGGAGGGACA CGATGTTGAG TCGTTAGACA ATTTACTGAT CTATTGTGTG
GTGGGGATCA TCGTCGGTGC CCGGTTAGCC CATTGCTTCT TCTACGACCC GGCCTATTAT
TTCAGCCACC CTTTAAAGAT CTTCGCTATC TGGGAAGGAG GATTGGCCAG TCATGGTGGT
GGTTTAGGCG CTATTTTAGC GCTCTTCTAT TATCATAAAA AAGTGAAGAT GCCTTTTCTC
TATCTGCTCG ACCGATTAGC CATAGCTACC GCGATATTTG GCTTTTTTGT CAGAATGGCA
AACTTCATGA ACTCTGAGAT CTTAGGCCTG CCGACCACGG CACCATGGGC GATTATCTTC
GAACGTGTCG ATATGCTGCC TCGTCATCCG GCGCAACTTT ATGAAGCCTT TGCCTATTTG
GCTATCTTCA TCGGTTTATC TGCAATATTC AAATATACCC GGATGAAGCA AAAAGAGGGC
GCAATATTCG GTCTCTTCCT CTGTCTCGTC TTCGGCGCCA GATTTGCTAT CGAATTTGTC
AAAGTAAAGC AGGCGGTCTA CGCCGATGAT TGGGTCATGA GTGCCGGTCA GATGTTGAGT
ATTCCCTTCC TTGTGGTCGG TATCGCTCTG TTGGTTATGC CTTATATTAA GTCTAACAGG
GCTGCGCAGT AA
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| Protein sequence | MDHFIWNIDP VLISFMGLKV HWYGALFATA IACGFQVMKR IYIKEGHDVE SLDNLLIYCV
VGIIVGARLA HCFFYDPAYY FSHPLKIFAI WEGGLASHGG GLGAILALFY YHKKVKMPFL
YLLDRLAIAT AIFGFFVRMA NFMNSEILGL PTTAPWAIIF ERVDMLPRHP AQLYEAFAYL
AIFIGLSAIF KYTRMKQKEG AIFGLFLCLV FGARFAIEFV KVKQAVYADD WVMSAGQMLS
IPFLVVGIAL LVMPYIKSNR AAQ
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