| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3908 |
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| Symbol | |
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| ID | 5611203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4776241 |
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| End bp | 4777017 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934862 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001475640 |
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| Protein GI | 157377040 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGA GAGCACTCTA CGCCACGGCA TTTAAGAGTA TTTTAACCAA AGAGATCAAT
CGTTTCACCC GGATCTGGAT ACAGACTCTG GTACCTCCGG CTATCAGCAT GACGCTCTAC
TTCCTGATCT TCGGGAACCT GGTAGGTAAG CGGATCGGTG AGATGGGTGG CGTCACCTAT
ATGGAGTTTA TCGCGCCGGG CTTGATTATG ATGGCAGTGA TCACGGCCTC TTACTCTAAT
GTGGCTTCAT CATTTTTCAG CGCCAAGTTT CAGCGTAACC TCGAAGAGTT GATTGTGGCC
CCGGTGCCTC ATTATGTGAT TATTGCCGGT TATGTGGGTG GAGGTGTTGC GCGGGGGCTG
TGCGTGGGTA GCATCGTGAC CGGAGTGGCA ATGTTCTTCG TCGATATCTC TTTGCATCAC
GCGGGCTTAG TAGCGATAAC TGTGCTGCTT ACCTCTATTC TGTTTGCGCT GGGTGGCTTA
ATCAATGCTA TATTTGCAAA GAGTTATGAT GATATCAGTA TTGTGCCAAC CTTTGTGTTA
ACGCCGCTCA CCTATCTAGG TGGCGTGTTC TACTCCCTGT CCCTGTTGCC TGATTTCTGG
CAAGGTGTGT CGGCACTGAA CCCTGTGGTC TACATGATTA ATGTGTTCCG TTACGGTTTC
TTAGGCTACG CCGATATCAG TGTGCCGTTT TCGATTGCCG TTATGGTGGG CTTCTGTATC
GGCTTGTGGA GTCTGGCGTA TTATCTGATC AGCCGTGGCA TAGGTTTACG TAGCTAG
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| Protein sequence | MNMRALYATA FKSILTKEIN RFTRIWIQTL VPPAISMTLY FLIFGNLVGK RIGEMGGVTY
MEFIAPGLIM MAVITASYSN VASSFFSAKF QRNLEELIVA PVPHYVIIAG YVGGGVARGL
CVGSIVTGVA MFFVDISLHH AGLVAITVLL TSILFALGGL INAIFAKSYD DISIVPTFVL
TPLTYLGGVF YSLSLLPDFW QGVSALNPVV YMINVFRYGF LGYADISVPF SIAVMVGFCI
GLWSLAYYLI SRGIGLRS
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