| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3860 |
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| Symbol | |
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| ID | 5611413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4710572 |
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| End bp | 4710772 |
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| Gene Length | 201 bp |
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| Protein Length | 66 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934814 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475592 |
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| Protein GI | 157376992 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3529] Predicted nucleic-acid-binding protein containing a Zn-ribbon domain |
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| TIGRFAM ID | [TIGR02443] conserved hypothetical metal-binding protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTGAAG CTAGAGTGAA GAGACGTTTT GTTGCCGGTG CTAAGTGTCC TGAATGTAAG
GCGATGGATA GCATAGTCTT GTTTAAAGTT AATGGTGTCG AAACCGTAGA GTGCATCGAC
TGTGATTACA GTGAGCAGCA GCCCGATGAA AAGGTGGCTA AGAAAGCCAC CGGCGATGTG
ATAGGCGTAT TTAAGCCTTA A
|
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| Protein sequence | MAEARVKRRF VAGAKCPECK AMDSIVLFKV NGVETVECID CDYSEQQPDE KVAKKATGDV
IGVFKP
|
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