| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3842 |
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| Symbol | |
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| ID | 5611794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4682871 |
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| End bp | 4684373 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934796 |
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| Product | adenylate cyclase |
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| Protein accession | YP_001475574 |
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| Protein GI | 157376974 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3025] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.023324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000503049 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGCCG AGATAGAACT AAAATTATTT TTTCAATTAG AACAACAAGA AACCTTAATT
CACTTGCTGG ATAGTTTACC TCACTCTGAG CCCAAAGGGG TAAAGAAACT CATCAATAGT
TATTTCGATA CCTCCGATCT TCAGCTGAGA AAATGGGATA TGGGGCTTAG AGTCAGAAGT
TGTGATGGTG AGAGAGAGCA GACAATAAAA ACGGCCGGCA GTGTGATCGG AGGGATCCAT
TCGCGGCCGG AATTCAATGT GGCTATCGAG CAAGATACAC CAGATCTCAG TAAATTTCCT
GAAAAAATAT GGCCTGAACT GTCTAAACTT TCATCAGTGC AATCTGAATT GGTCTGTCTG
TTTAATACCG ATTTTGTCAG GCGAAGATGG CATATATATG TCGGTGACAG CTTAGTCGAG
CTCGCCTTAG ATATTGGTCA GGTGAGCGTC AAAAGAGAAG GGAAAGTGAT ATCAGAGCCT
ATTTGTGAGC TCGAATTTGA ACTTATGGCA GGTGAAACAT CGGCACTTAT TCAGTTAGGA
TTATTGGTTG CCGAGCAGAT CCCGGTACGT TTAGGTAAGG CGAGTAAGGC ACAAAGGGGA
TATCGTTTAG CCGCACAGGC GAGCCCTCTG AGCCTGGAGG CATTAGATTT TATTGCATTA
GTACCAGAGC AAGATCTTAA ACACACCTTT ATCGCGCTGT TGAGCACCGG TCTTGAGCGT
TGGCAGTTAC TCGAAGCCAT GATTCTCGAA TCCGGTATCA AGGATGATGA ACAAGCCCCT
CACCTTTGCT ACAGGCTTAG GGCATGTGTT CGTCTGCTCA GATGTACACT GGCGCAATTT
AATCTGCTTG ATGACAAGTT GGCGTCTAAG TTTGATTGTA TCGAAGGGCA TCTGGATTTT
ATTGAAACGG GTTTGAGTCT GGTCGAAATT ATCGATCAAA ACAGTTTACT GATCGCTAAA
CTCCCTCAGG AAAAACGGCT AACGGCGGCG ACCTTGGCTC AGTTGAAAGG TTTATCGATT
CCACAGCTTA TAGACAAAAT GTTGAATGAT ACCTGCTATG GAGGCCTTCA ATTAGCACTC
GTTGATCTGC TGCTTGCTTT TCAGGCGGGT AAAAAGGTCA TAGATAAAAG GCTGGAGCTG
CAGGAGTTTG CCGATAAGAT GCAGGAAGCC TCATGGCAGA AAATCGTTAA ACTTATGCCC
TCTAGCGAAG ATCTCAGCAG TCAGGAATAC CAATCTTTTG CACGTGCCCT GGATGAGAGT
ATTTTTGTCG GAGTAGCATA CGGTGCCCTA TATCCAACGA AAGCCAGAGA TCTGTTCAGG
ACTCCGTGGC AAGATCTTGT CTTGGGAATA AGGACATTAG CGGCATATCG GCAACTGGCA
GAGTTGAGTG AGTCAGAAGC TATCGATATT TCGGACTGGT TGCTTAATAA GGAACATAGC
CTGCTGTTTG CGATGGAGCA CTCCAGACGC TCGGCGTTAA AGAACGAACC TTATTGGCGC
TAG
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| Protein sequence | MDAEIELKLF FQLEQQETLI HLLDSLPHSE PKGVKKLINS YFDTSDLQLR KWDMGLRVRS
CDGEREQTIK TAGSVIGGIH SRPEFNVAIE QDTPDLSKFP EKIWPELSKL SSVQSELVCL
FNTDFVRRRW HIYVGDSLVE LALDIGQVSV KREGKVISEP ICELEFELMA GETSALIQLG
LLVAEQIPVR LGKASKAQRG YRLAAQASPL SLEALDFIAL VPEQDLKHTF IALLSTGLER
WQLLEAMILE SGIKDDEQAP HLCYRLRACV RLLRCTLAQF NLLDDKLASK FDCIEGHLDF
IETGLSLVEI IDQNSLLIAK LPQEKRLTAA TLAQLKGLSI PQLIDKMLND TCYGGLQLAL
VDLLLAFQAG KKVIDKRLEL QEFADKMQEA SWQKIVKLMP SSEDLSSQEY QSFARALDES
IFVGVAYGAL YPTKARDLFR TPWQDLVLGI RTLAAYRQLA ELSESEAIDI SDWLLNKEHS
LLFAMEHSRR SALKNEPYWR
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