| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3833 |
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| Symbol | |
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| ID | 5613149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4672431 |
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| End bp | 4675295 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934787 |
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| Product | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase |
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| Protein accession | YP_001475565 |
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| Protein GI | 157376965 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
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| COG ID | [COG1391] Glutamine synthetase adenylyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0981487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000620958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGAAAATA TCAGTAACAA GTCGTTACCC GCCATTATCA CTGACGTTGC GGATCGTTAC
TGGCAAAGGT TAAATGAAGC GTGGCCTGAG CTCTCGACCT TAATAGATAA GAAGCATTGC
GATGAGCTTT ACCGGATCAT GGGGGTGAGT GATTTTATCG CGGAGCAATT ATGCCGACAT
CCTGACTGGA TCCCCGCCCT ATTCGATGGG CAGTTAGTTA AGGTTGAAAG GCTAAGTTTC
GATAGAGAGC TGCATGAACT CATGGAGCCT TGCCGTAGCG AAGATGAAGC GAAAGCCATT
TTAAGGTGCT ATCGAAATCG GTTGATGGTG CGACTGGCCT GGCGAGACTT TTTCGGATAT
GTGAGCCTCG AAGACTCGCT GCTCGATCTC TCTGCCCTGT CTGAGGCGCT GATCATTGCC
GGACGTGACT GGCTCTACCG TGAGCTCTGT CAGCAATACG GAACGCCTTG TGACCGTGAG
GGAAATCCTC AACCCTTGAT GGTTATCGGA ATGGGTAAGC TGGGGGGACG TGAACTCAAT
TTTTCTTCAG ACATCGATCT TATCTTTACC TTCCCTGAGC ACGGAGAGAC ACAAGGTGGC
CGCCGCGCCT TGGATAATCA ACAGTTCTTT ATTAAAATGG GCCAGCGTCT GGTGAATCTG
CTCCATCAGG TTACTGTGGA TGGTTTTGTC TACCGTGTCG ATATGCGACT TCGCCCCTAT
GGAGAGAGTG GCCCTCTGGT GGTCAGCTTC AGTGCTCTGG AAGATTATTA TCAGGAGCAG
GGTCGCGACT GGGAACGTTA TGCCATGGTG AAGGCGCGTG CGTTGGGTCC TTGGACTGCA
TTTTCTGATG AGCTGCACTC TATGCTGAGG CCATTTGTTT ATCGCCGCTA TATCGATTTT
TCGGCTATTG AATCTCTGCG TAAAATGAAG CAGTTAATCA CCCAAGAGGT CAGGCGACGT
AAGCTTACCG ATAATATAAA GCTGGGTGCC GGCGGGATCC GGGAAGTCGA ATTCGTGGTG
CAGAGTTTCC AGCTTATCCG TGGGGGACGG GAGCCTTCAT TGCGTCAGCA AAGTCTGTTT
GCCGCTATCG ATACCCTGTA TACCTTAGGA CAGCTTGAAT ATTTGGCTGT CGATGATCTC
AAGCAGAGTT ACCTGTTATT GAGGCGAGTG GAAAACTTAC TCCAGGCCAT AGGCGACCGA
CAGACTCAGA CCTTGCCCGA TAATGGTCTG GATTGGTATC GATTGTGTCA CTGCATGGGA
ATGGCTTCAG AAGCCGAGCT AAGAACGCAT ATCGAGTCTG CCATGAGCAA GATCCATCGA
CACTTTAATG ATACGGTCGG GGGTAATGAG CAGGATGAGT CATCACAGTT GTGGACGCAG
CAGCTCTGGA GTGTGCAAGA GGATGAGCAT GCACAAGCGC TCATTAGTGA GCAGTCTATC
GAAGACCCGG ATCTCTGGCC CATGCTGAAA TCATGGCGCG ATACCATTGC GAAGCGTTCC
ATTGGACCTC GCGGCCGGGA TACCTTAGAT AAATTGATGC CCTGGCTCTT GCGTGAGTTA
ACTCCGCTGG TGTCTCCCTC CAAAGCCTTT GAGCCTGTGT CTAAGGTATT GGATCAGATC
CTGACCCGCA CGACCTATCT TGAACTCTTG TATGAGAATC CCGGCGCACG TCAACAGCTG
GTGAGTTTAT GTTGTGCCAG CCCATGGATT TCGGCTCAGC TGGCAAAATT TCCCATGTTG
CTCGATGAGT TGATCGATCC GGCTCAACTC TATGATACGA CCTCATTAGA TGATTATGGC
AGTGAGCTGC GTCAATACCT GTTGCGTGTG CCGGAAGAGG ATATGGAGCA GCAGATGGAG
GGGCTGAGAC AGTTTAAACT ATCGCAGCAA TTGAAAATTG CCGCGGCTGA CGTGACCGGA
GTATTACCTG TGAGTCAGGT GAGCAACCAT TTGACCTTGC TGGCAGAAGC GATAATTGAG
CAGGTGGTGA TGCAAGCCTG GTTACAGGTC AGTTCCCGCC ATGGCGTTCC TACTCATCTC
GATGAGGGGG ATATGGGTTT TGCGGTTATC GGCTACGGTA AAGCTGGTGG GATTGAGCTG
GGTTACGGGT CAGATCTTGA TTTGGTCTTC CTGCACAGTT ACTCCCGAGA ACGTTTTCCG
GAGAATACAG AGACTAATGG CGAACGTCCG ATAGAGGTTG GCCATTTTTA TCTCAAGTTG
GCGCAAAGGA TCCTACACCT GTTTTCAACC CGAACGAATT CAGGTGAGCT TTATGAAGTA
GATATGCGCC TCAGGCCGTC CGGTGCTTCG GGTCTGCTAG TGAGCGAGAT AGAGCATTTC
GGTCAATATC AGCGTGAAGA AGCATGGACA TGGGAGCATC AAGCCTTAGT GAGAGCTAGG
TTTATGTTTG GAGATAATGC GTTATCCAGC CGTTTTAGTA CGCTACGCTC CGAGGTTTTA
CAGTTACATA GAGAGAAGGA GACTCTGGCT CAGGAGGTGA GAGAGATGCG TTTGAAGATG
CGAGAGCATC TGCTTAAGGT TAGCCCGGAT ATGTTCGATC TTAAACAGAG TGCTGGCGGG
ATCGCAGATA TTGAGTTTAT CGCTCAATAC CTGGTGCTGG CTAATGCCAA TGAGCACAGT
GAACTCAGTA TCTGGTCTGA TAACATCAGA ATCTTCTCGA CTCTCGGAGA GTTAGCCCTA
TTGCCTCAAC TCGATGCTCA GGAGTTAATT CAGGCGTATC TGTTTTTGCG TGATGAGAAC
CACAGGCTGA CATTGCAACA AAAGCCCGGA CAGCTCGCTT TGGAGCTGGT GGAGCTACAT
GCGCAGCGGG TGATTGAAAT TTATCAAAAC GTACTCGAGT TCTAG
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| Protein sequence | MENISNKSLP AIITDVADRY WQRLNEAWPE LSTLIDKKHC DELYRIMGVS DFIAEQLCRH
PDWIPALFDG QLVKVERLSF DRELHELMEP CRSEDEAKAI LRCYRNRLMV RLAWRDFFGY
VSLEDSLLDL SALSEALIIA GRDWLYRELC QQYGTPCDRE GNPQPLMVIG MGKLGGRELN
FSSDIDLIFT FPEHGETQGG RRALDNQQFF IKMGQRLVNL LHQVTVDGFV YRVDMRLRPY
GESGPLVVSF SALEDYYQEQ GRDWERYAMV KARALGPWTA FSDELHSMLR PFVYRRYIDF
SAIESLRKMK QLITQEVRRR KLTDNIKLGA GGIREVEFVV QSFQLIRGGR EPSLRQQSLF
AAIDTLYTLG QLEYLAVDDL KQSYLLLRRV ENLLQAIGDR QTQTLPDNGL DWYRLCHCMG
MASEAELRTH IESAMSKIHR HFNDTVGGNE QDESSQLWTQ QLWSVQEDEH AQALISEQSI
EDPDLWPMLK SWRDTIAKRS IGPRGRDTLD KLMPWLLREL TPLVSPSKAF EPVSKVLDQI
LTRTTYLELL YENPGARQQL VSLCCASPWI SAQLAKFPML LDELIDPAQL YDTTSLDDYG
SELRQYLLRV PEEDMEQQME GLRQFKLSQQ LKIAAADVTG VLPVSQVSNH LTLLAEAIIE
QVVMQAWLQV SSRHGVPTHL DEGDMGFAVI GYGKAGGIEL GYGSDLDLVF LHSYSRERFP
ENTETNGERP IEVGHFYLKL AQRILHLFST RTNSGELYEV DMRLRPSGAS GLLVSEIEHF
GQYQREEAWT WEHQALVRAR FMFGDNALSS RFSTLRSEVL QLHREKETLA QEVREMRLKM
REHLLKVSPD MFDLKQSAGG IADIEFIAQY LVLANANEHS ELSIWSDNIR IFSTLGELAL
LPQLDAQELI QAYLFLRDEN HRLTLQQKPG QLALELVELH AQRVIEIYQN VLEF
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