| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3762 |
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| Symbol | |
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| ID | 5610159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4584670 |
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| End bp | 4585395 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934716 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001475494 |
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| Protein GI | 157376894 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000558421 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATTAAGA TTAATAATTT ACATAAGAGC TTTGGCGATA ACCAAGTGCT GAAAGGGATA
GATGAGCAGA TTAACCATGG CGAAGTCGTC AGTGTGATCG GCCCATCGGG CAGTGGCAAG
AGTACCTTCT TGCGTTGCAT CAACTTGCTT GAGCAACCGA CTCAAGGGGA TGTTCTTATC
GATGGTCAAT CTATCACAGA GTCTGGCGCC TGCATCGATA AGCTAAGGCA GAAAGTGGGC
ATGGTGTTTC AGAACTTTAA CCTGTTCCCC CATAAAACGG TTAAACAAAA CATCACTCTC
GCCCCGGTAA AGCTTGGGGT GATGACTGCG AAAGAGGCCG ACGGCGAAGC CGAAGCGTTA
CTCGAGCAGG TAGGATTGCA GGATAAAGCC GATGCCTACC CGTCCAGCCT GTCGGGTGGC
CAGAAACAAC GGGTCGCCAT CGCTCGTGCC TTGGCAATGA AACCTGAGCT GATGCTGTTC
GATGAGCCCA CCTCGGCGCT GGATCCTGAG ATGGTGGGTG ATGTACTCGA TGTGATGAAA
TCTCTGGCTC ACAAGGGGAT GACCATGGTG ATCGTCACCC ACGAAATGGG CTTTGCACGA
GATGTGTCAG ACAGAGTCAT CTTCATGGAT GGCGGCGTTA TCGTAGAAAA CAGCGAGCCG
GAAGCCCTGT TCAGCGCACC GAAAGAGGCA AGAACTCAGG CCTTTTTGAG TAAAGTGTTG
AGGTAA
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| Protein sequence | MIKINNLHKS FGDNQVLKGI DEQINHGEVV SVIGPSGSGK STFLRCINLL EQPTQGDVLI
DGQSITESGA CIDKLRQKVG MVFQNFNLFP HKTVKQNITL APVKLGVMTA KEADGEAEAL
LEQVGLQDKA DAYPSSLSGG QKQRVAIARA LAMKPELMLF DEPTSALDPE MVGDVLDVMK
SLAHKGMTMV IVTHEMGFAR DVSDRVIFMD GGVIVENSEP EALFSAPKEA RTQAFLSKVL
R
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