| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3756 |
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| Symbol | |
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| ID | 5609825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4576624 |
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| End bp | 4577790 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934710 |
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| Product | peptidase M19, renal dipeptidase |
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| Protein accession | YP_001475488 |
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| Protein GI | 157376888 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACA ATGCTTGCAA TCCAACCCGT CGAAGAATAC TTAAAGGGTT AGCGGCCGCC
TCATTATTAA GCCCGCTGGG GATTTCGCCT GCATTTGCCG CGGCCAAAAA ACGCCTTTAT
ATCGATGGCC TCTCCTTTCT TCCTGAAAAT CTAGCCGATA TCCGTGCCTC CAAACTCGAT
GCCTACCTTT GCGATATTTC AGCCATTGAA ACCATAGAAC AAGCCGACGG CACCATGAAT
TACAAGCGTA CCTATGACGC CTGTATGAAA AGCATTAAAG AAGCGAACCA AATCGTTAGC
GCCAACCCCA ACATATTAAT GCCGGGGCTG ACAGGCCAGG ACATCGCACT GGCAGTCGAG
CAAGAGCGCA CTGCCGTCTA TTTTCAGATC CAAGGCGCCG ATTGTGTTGA AGCCGATAGC
GATGCCAACT CATGGCAACA TCTCGATCAA TTTCACCAGC AAGGTTTACG GGTATTACAA
CTGACGCACC ACTACGGCAA TCGCTTTGCC GGCGGCGCAT TAGATAATGA CGGTCAACAG
GGTTTAAATA AGCCGTTAAC TGCAGATGGC CGCCAATTGA TCGCCGCACT TAACCAGCGC
AACATGCTCA TCGATGTCAG CCATTCGAGC CCCCAGACGG CGCTGGACAC CGTAAAAGCC
AGTAACAGTC CGATAGTACA CAGCCACGGC GCCGTTCGCT CTATCGTCAA CAATGCCCGT
TGCTCACCCG ATGAAGTCAT CCGTGCTATC GGTGACAGCG GTGGCGTATT CGGGGTGTTT
ATGATGAGTT TTTGGTTGAC CAATAAACCC CTACCGACCA TTAAAGATTA TGTAAAGCAA
CTCGATCGCG TCGTCCGTAT CGGCGGCATA GATTGTGTCG CCATCGCCAA CGACTTCCCA
CTGCGTGGCC AAGAGAACTT ACTGGCGCTG GGCAATGATA ATGCCGAAGG CATCAAAGAG
TACTTACCTT GGTGGCACAG TTTAGCCGCT AAAAATGTGT TGGGATTTGA ACACGAACCC
ACACATGTCG TGATCCCCGA ACTCAACGAT ATTGATCGCA TGAGCCGCAT CGACGATGCA
CTAGCCAAAG CGCGCTACAA ATCCACCGAC AGAGACCGCA TGCTCGGTGG TAACTGGCAA
CGCGTGCTTA AAAACGTATT GGGTTAA
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| Protein sequence | MTNNACNPTR RRILKGLAAA SLLSPLGISP AFAAAKKRLY IDGLSFLPEN LADIRASKLD
AYLCDISAIE TIEQADGTMN YKRTYDACMK SIKEANQIVS ANPNILMPGL TGQDIALAVE
QERTAVYFQI QGADCVEADS DANSWQHLDQ FHQQGLRVLQ LTHHYGNRFA GGALDNDGQQ
GLNKPLTADG RQLIAALNQR NMLIDVSHSS PQTALDTVKA SNSPIVHSHG AVRSIVNNAR
CSPDEVIRAI GDSGGVFGVF MMSFWLTNKP LPTIKDYVKQ LDRVVRIGGI DCVAIANDFP
LRGQENLLAL GNDNAEGIKE YLPWWHSLAA KNVLGFEHEP THVVIPELND IDRMSRIDDA
LAKARYKSTD RDRMLGGNWQ RVLKNVLG
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