| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3702 |
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| Symbol | |
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| ID | 5610140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4506028 |
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| End bp | 4506714 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934655 |
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| Product | membrane-flanked domain-containing protein |
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| Protein accession | YP_001475434 |
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| Protein GI | 157376834 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3402] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.327251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCATG AAACGCCTGA AATAAAAGAT AATTTAAAGA GTGAGCCATT AGATCCCTGT
TCATTAGAGC ACGATCTATT AGACCGCTCT CCCTTAGATC ACAATCCACA GCCTCTGGAA
CAGTGGCAAA GCTTCGACCA GATCCCATTG TCACCGGTTG AGCCGCGCCA TTACACACAA
GTACTCATTG AAACGGCGGC CATTGCAATA ACCTTTATCT CGACCTTGTC GGTATTTCTC
ATTTTTGTCG CGACCATTCC CCTGCCCATC GCGGCAATCG TCATTCCGGC TCTGTTGATG
ATTGGTTCTG GGATCACTTG GCTGAGGTAC CTCAATGCCA AGGCAATAGG TTACGCGGTC
TGTCCCCATG AACTCGTGAT GCAGACCGGA ATCATTTGGG TGAAGCGGAT CTCACTCCCC
TATACCCGAC TGCAACATAT CAGCCTGTCT CAAGGCCCGT TAGAGCGAAA GTTTTATCTG
CGGACCCTTA AATGTTTTAG CGCCGGAAGT GGCAGTGCAG AGATCGAACT GCCCGGGTTA
GAGAGTAAAA CCGCAGAAAA GCTCAGACAA CACCTGCTCA GCATGGCGGC AGTCGCCATC
AAAAACACAG CTATCGTGAA TGAGAAGGAG GTGAATGAAG AAGAGGTGAA ACAAGAGGAG
CCCGCAGCCG ACGGGGCAGA GCAATAA
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| Protein sequence | MPHETPEIKD NLKSEPLDPC SLEHDLLDRS PLDHNPQPLE QWQSFDQIPL SPVEPRHYTQ
VLIETAAIAI TFISTLSVFL IFVATIPLPI AAIVIPALLM IGSGITWLRY LNAKAIGYAV
CPHELVMQTG IIWVKRISLP YTRLQHISLS QGPLERKFYL RTLKCFSAGS GSAEIELPGL
ESKTAEKLRQ HLLSMAAVAI KNTAIVNEKE VNEEEVKQEE PAADGAEQ
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