Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3679 |
Symbol | |
ID | 5613490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 4485166 |
End bp | 4485474 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640934632 |
Product | hypothetical protein |
Protein accession | YP_001475411 |
Protein GI | 157376811 |
COG category | [S] Function unknown |
COG ID | [COG3027] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGCC ACGCTATTGA AATTAGCTTA TTAGGCCGTA CATACTCCAT CGCTTGCCCA CCAGGACAAG AGGGTGCATT GCAGCACGTG GCACAAAACC TCGAACAACA GTTGAGTTCA TTGAAAACCC GAACCAACAA TTTGAGTCGC GAAGAAATTG CCATTATGGC AGCCTTGAAT ATCGGTTATG AGTTGTTGGA AGAACAGCAA AAGAATCAAG ATTATATTAA GCAGATGGAT GATAAGATCG GTTTGCTTCA GTCGACTTTA GAGAACGCAC TCGTTGAGCG TTCGACAAAA GACGATTAA
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Protein sequence | MSSHAIEISL LGRTYSIACP PGQEGALQHV AQNLEQQLSS LKTRTNNLSR EEIAIMAALN IGYELLEEQQ KNQDYIKQMD DKIGLLQSTL ENALVERSTK DD
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