| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3678 |
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| Symbol | |
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| ID | 5613489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4484018 |
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| End bp | 4484584 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934631 |
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| Product | YecA family protein |
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| Protein accession | YP_001475410 |
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| Protein GI | 157376810 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3079] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02292] yecA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTACCC CTCCCTCTTT ACGTATAGAC AACTTAATGG CAGCACTCGA CGCGGCAGAA
ATTGGTCAGC AGCCGGGTGA AGTACATGGC GCGCTTGTGG GCTTGATTTG CGGCGGTGTC
GAGCAATCAA AAAAGGCATG GAATAGTACA TTTCTGGAGC TGATGAATGA TGGTCAGCCT
CTGCCCGATG CATTGCAGCA ACTCATCGAT GAGCTCTATC AGGATACCCT GGCAAGATTA
TCGGATGCCG ATTTTGGCTT TACCCCTATG CTGCCTGAAG AGGAGGAGCC CTTAGCCAAA
CGTGTCGAGG CACTTTCTCT ATGGGTACAA AGCTTCCTGA CCGGTATCGC CATGGTTCAG
CCCAAGCTGA ACAGGGCGTC GAGTGATGTT CAGGAGGTCA TTAAAGATCT TGCCGAAATC
GCCTTGGTAG AATTTGATGT CGCCGATGAT GACGAGTCTG AGTCTGCATA CATGGAACTG
ATGGAGTTCT CTAAGATGGC AGCCTTGCTC TGCTACTCAG AGTTTGGCCC TGAGCCCACA
GAGCAAGAAG CGGGTGTTAT TCACTAA
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| Protein sequence | MATPPSLRID NLMAALDAAE IGQQPGEVHG ALVGLICGGV EQSKKAWNST FLELMNDGQP
LPDALQQLID ELYQDTLARL SDADFGFTPM LPEEEEPLAK RVEALSLWVQ SFLTGIAMVQ
PKLNRASSDV QEVIKDLAEI ALVEFDVADD DESESAYMEL MEFSKMAALL CYSEFGPEPT
EQEAGVIH
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