| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3633 |
|---|
| Symbol | |
|---|
| ID | 5612095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 4422878 |
|---|
| End bp | 4424947 |
|---|
| Gene Length | 2070 bp |
|---|
| Protein Length | 689 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640934586 |
|---|
| Product | endothelin-converting protein 1 |
|---|
| Protein accession | YP_001475365 |
|---|
| Protein GI | 157376765 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3590] Predicted metalloendopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000899606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000004601 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT CCTTAATAGC TATTGCCTTA GCCACGACTT TTTTAGCGGG CTGCGGCACT
TCAGACATCA ACAACGAAGC GAAAAGTGAA ATAACCAAGG TAACCCCCGG TAAAGCCGAG
CTGGGTAGCT TCGGTGTCGA TCTATCGGCG CGCAACGAAG CCGTTAAACC CGGCGATGAC
TTCTTTATGT ATGCCAGCGG TACCTGGTAT GACAACTATG TTATGCCGGC CGATAAGACC
CGCTTCGGTG CATTTACCGG TTTGGCTGAG CGCAGTGAAA AACAGGTCAA AGAGATCATC
GATGACATCG CCAGTCGCAG CGACCTGAAC GATGAAGAGC AATTAATTGC TGACTTCTAC
AAATCATACA TGGACACAGA TACCATCAAC AAGCTGGGGA TCACCCCAAT TCAGGCCACC
CTAGATCAGA TAGCTGAGGT CAAATCTACC GATGATCTAA CTAAGGTATT TGGTAACGCC
TGGCTCACGG GCGCTGCATC TCCCATCGGT GGTGGCATGT GGTTTAATCG CCTCGACCCG
AATCAGTACG AGATGTCTGT CGGCGCCGGC GGCTTAGGCT TACCCGATCG CTCCTATTAC
CTCGAAGACA GCGAACGTTT CGTCAAAATC CGCACCGCCT ATGTAGAACA TATTGCCGAG
ATGCTGACCT TTGCCGGCGT TAAAGACGGT AAAACACAAG CGACTGCGAT TCTAGCCCTG
GAGACTAAGA TGGCAGAAGG CCAATGGCCA AGAGAGAAAC GCCGTAACCG CGACCTCACC
CTGAATCAGG TAAAACGTGA AGACTTAGCC AAGCAGTACC CGGGGTTCAA TTGGGATACC
TACTTCGCTC AAACCGGTTA CCAGGTGCCG CAACTAAACA TCTCGCAGCC TGAGCCGGTA
AAAGCCATGA TTGCTTTAGT TAATGATGAG TCCCTCAGCG TTTGGCAGGA CTACCTGACG
TTCCACACCA TCAGTAACAA TTCGGACCTA CTGTCTGAAG ATATCTACGC CGCGAATTTT
GCGTTTTATG GTAAGACCCT AAGTGGTCAG GAGGAACCTA AGCCTCGCTG GAAACGTGCC
GTTGCAGAGA TGTCAGGCAC GCAGTCTCTG GGCTTCGCCA TAGGTAAGGT CTACGTTGCA
CGCTACTTCC CTGAGTCATC AAAACAGCAG ATGGCAGAGC TGGTTGAAAA CCTGCGTAGC
GCCTTGGGCC AACGTATCGA TGGTCTCGAC TGGATGGGCG CGGATACCAA GGTCAATGCC
CACGCTAAGC TTGCCGCATT TACCCCTAAA ATTGGTTACC CTGACGTATG GCAGGAGTTC
GAAGGGTTAA CGCTAACAGG CGAAGATTTA GTCGGCAATA TCGCTAACTT GCGTCAGTTC
TTTAAGGCTG AAAGTGTCGC CAAAGAGCTG AAGAAGACTG ACCGTAATCG CTGGGGCATG
ACGCCACAAC GTGTTAACGC CTACTACAAC AGCTCATTTA ACGAGATTGT CTTCCCGGCT
GCCATCCTCC AACCACCATT CTTTGACCCT AACGCCGACC CAGCCGTTAA CTATGGTGGT
ATCGGTGCAG TTATCGGCCA CGAGATGGGC CACGGTTTCG ACGATCAAGG CTCAAAGTCC
GATGCCAACG GCATCCAGCG CAACTGGTGG ACAGACGAAG ACCGCGCCGC CTTCGATGCA
AAAGCCGATA AGTTAGCCGA GCAGTACAGC AAGTACGAGC CGATCCCGGA TAACTTCGTC
AATGGCCGTA ACAGCCTGGG CGAAAATATC GGTGATGTGG GTGGTTTAGC CATGGCTTAC
CATGCCTACA AGCTCAGCCT GAACGGCAAA GAAGCCCCGG TGATCGATGG TGTAACCGGC
GATCAACGTT TCTTCCTCGC CTGGGCTCAG GTATGGAAAG AGAAGCGCAC CGAACAGAGC
ATGCTCAACC AACTCCGTGG CGGCACTCAC GCACCGGGCC GATACCGCGC CCAGGCACCA
CGAAATCATG ATGCTTGGTA CAAGGCTTTC GATGTTAAGC CAGGTGACGA ACTATACTTG
CCGGAAGACC AGCGCGTCCG TATCTGGTAA
|
|---|
| Protein sequence | MKKSLIAIAL ATTFLAGCGT SDINNEAKSE ITKVTPGKAE LGSFGVDLSA RNEAVKPGDD
FFMYASGTWY DNYVMPADKT RFGAFTGLAE RSEKQVKEII DDIASRSDLN DEEQLIADFY
KSYMDTDTIN KLGITPIQAT LDQIAEVKST DDLTKVFGNA WLTGAASPIG GGMWFNRLDP
NQYEMSVGAG GLGLPDRSYY LEDSERFVKI RTAYVEHIAE MLTFAGVKDG KTQATAILAL
ETKMAEGQWP REKRRNRDLT LNQVKREDLA KQYPGFNWDT YFAQTGYQVP QLNISQPEPV
KAMIALVNDE SLSVWQDYLT FHTISNNSDL LSEDIYAANF AFYGKTLSGQ EEPKPRWKRA
VAEMSGTQSL GFAIGKVYVA RYFPESSKQQ MAELVENLRS ALGQRIDGLD WMGADTKVNA
HAKLAAFTPK IGYPDVWQEF EGLTLTGEDL VGNIANLRQF FKAESVAKEL KKTDRNRWGM
TPQRVNAYYN SSFNEIVFPA AILQPPFFDP NADPAVNYGG IGAVIGHEMG HGFDDQGSKS
DANGIQRNWW TDEDRAAFDA KADKLAEQYS KYEPIPDNFV NGRNSLGENI GDVGGLAMAY
HAYKLSLNGK EAPVIDGVTG DQRFFLAWAQ VWKEKRTEQS MLNQLRGGTH APGRYRAQAP
RNHDAWYKAF DVKPGDELYL PEDQRVRIW
|
|---|
| |