Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3628 |
Symbol | |
ID | 5612403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 4418105 |
End bp | 4418350 |
Gene Length | 246 bp |
Protein Length | 81 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640934581 |
Product | hypothetical protein |
Protein accession | YP_001475360 |
Protein GI | 157376760 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000561848 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00583621 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTAGGCG AAGATCACTC TCTTATTAAT GAGTTTCCTG AATACCGAGA TATTGTTGTT AAGCTTTCTC AAAGCAACGA AGCCTTTGCA AAAGGAGCCA AACATTACAA TGCGCTGGAT AAAGAAATTC GAGAGCTCGA ATTAAAGGGC GCGCCAATCG ATGATGAGTC CATGCACCAA TTAAAGCACG ACAGAGCCGA ACTGAAAGAT TCACTGTTTC AGCGCTTATC GATTGAAAAA GCATAG
|
Protein sequence | MLGEDHSLIN EFPEYRDIVV KLSQSNEAFA KGAKHYNALD KEIRELELKG APIDDESMHQ LKHDRAELKD SLFQRLSIEK A
|
| |