Gene Ssed_3628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3628 
Symbol 
ID5612403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4418105 
End bp4418350 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content41% 
IMG OID640934581 
Producthypothetical protein 
Protein accessionYP_001475360 
Protein GI157376760 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000561848 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00583621 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAGGCG AAGATCACTC TCTTATTAAT GAGTTTCCTG AATACCGAGA TATTGTTGTT 
AAGCTTTCTC AAAGCAACGA AGCCTTTGCA AAAGGAGCCA AACATTACAA TGCGCTGGAT
AAAGAAATTC GAGAGCTCGA ATTAAAGGGC GCGCCAATCG ATGATGAGTC CATGCACCAA
TTAAAGCACG ACAGAGCCGA ACTGAAAGAT TCACTGTTTC AGCGCTTATC GATTGAAAAA
GCATAG
 
Protein sequence
MLGEDHSLIN EFPEYRDIVV KLSQSNEAFA KGAKHYNALD KEIRELELKG APIDDESMHQ 
LKHDRAELKD SLFQRLSIEK A