| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3573 |
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| Symbol | |
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| ID | 5611616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4353810 |
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| End bp | 4356272 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640934526 |
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| Product | chaperone endopeptidase Clp ATP-binding chain B,ClpB |
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| Protein accession | YP_001475305 |
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| Protein GI | 157376705 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCAGC AATATATCCG TCAATGCAAT CAAGAGGTCC ACAAGACCCT CAATGCCGCT
ATCGCAGAAC TGGCAAACGC CCATCAGAAT GTACTGACCC CTGAGCATAT CCTGCTTGGC
TTACTATCAC TTCCGGGCTC TGAAGCAGCT CAGCTACTAC AACAGATATT GCCCGATCCC
GAGAAGAGTA TCGAAGCCCT GACCCGGGCC GTGTATCACG ATCATGAAAA TACTCCTCTG
AAGGGCGATA CCACTCAGGT GGTCGCCGCA CAGGAAGTCG AAGAGATTTT CGGCATAGCC
CTTAGTGAAG CCAAACGACT CGGCGATGCT TACATAGGTA CGGGCAGCCT GTTACTGGCC
CTGTGCGATA AGAGGGCCGG CGTCACCGCC ATTCACCTGA ATAATCAGGG GATCAAGGTG
GGCCCGGCTC GTGAGGCGCT GGTAAAACTG AGAAGTGGCA AAACCTTAGA CACGCCCGAT
GCCGAGGGCC GCAGCGATCC CTTAGATGAA TATACCCAAG ATTTAACAGA GATGGCCCGT
AATAACCAAC TCGACCCGGT TATTGGCAGA GAGGATGAGA TAGGACGAGT CATTCAAACC
CTATCCAGAC GTAAGAAGAA TAATCCGGTA CTTATAGGTG AGCCCGGTGT AGGTAAAACC
GTGATAGTCG AGGGGTTAGC CCAGCGTATC GCCAATGCTG AGGTGCCCGA TACCCTGCGT
GATAAACGCC TGCTCTCATT AGATCTCGCC GAGCTGGTCG CCGGGGCCAA TATGCGCGGA
GAATTTGAGG AGCGTCTCAA GGGGGTCAGG GATGCGGTGA TAGAGGCAAA GGGGCAGATC
ATTCTCTTCA TCGATGAACT GCATACCGTG GTGGGTGCCG GCGCCGGCGC TGGCGGACTG
GATGCCCCCG CCCTGTTAAA GAGTGCGCTG GGACGAGGAA CACTACAGCT GATAGGTGCA
GATACACTCG ATGAATACCA CAGATATGTC GAGGCAGATA AAGCTCTGGA GCGGCGTTTT
CAACCCATCT TAGTGCGCGA GCCCAGCATA GAGGAGACCA TAGATATCCT CAATGGCTTG
GCTGGAAAAT ATGAGGGCCA CCATGATATA GAATACCAGC CGGAGGCGCT GGAGGCCGCG
GCCAGACTGT CGGAGCGTTA TATCGCGGAC AGACACCTGC CGGATAAGGC AGTGGACCTT
ATCGATGAAG CCGGAGCCGA TAGACACCTG CACCTGCTGG CGCTGTCGAG ACCGATGAAG
GAGCTTGAGC GCAAGCGTCA GGCACTGCTG TCAGGCAAGC AAAAAGCCTA TAACGAGCAG
GCCTTCGAAC GTGTCGCCAA CATGCAGACC GAGATCCTTA AATTAGAACA GCAGCTCTCG
CTACAACGTG AACAGCAAAC CACCGATACC GCCAGTGAAG ATAAGGCGGT CAACCCCGAA
GATATCGCCC GAGTGGTCGC CCGCTTGACC GGGATCCCGG CCGCCCGCCT GGCCGAGTCT
GAGGTAGAGA AGCTGTCTCA TATGGAAGAC ATGCTACATA AGCGCATCAT AGGTCAACAA
GATGCCGTGT CTGCGGTGGC CAATGCCATT CGCCGTAACC GAACCGGTAT CAATCGCAGT
CATCGCCCCA TCGGCTCCTT CCTGTTTCTC GGCCCGACCG GAGTAGGTAA AACCGAGCTG
GCAAAGGCGC TGGCGGAGTT TATGCTCGAT GATGAGAGCC GCATAGTACG ACTGGATATG
TCCGAATATA TGGAGCGTCA CGAGGTGTCC AAGATGATCG GGGCACCACC GGGCTATATC
GGCTACGGTG AAGGGGGGCA GCTCACGGAA AAGGTCCGCC GTAATCCCTA CACCATCATA
CTGCTGGACG AGATGGAGAA GGCGCATCCC GATGTGTTTA ACATGCTGTT GCAGATCTTA
GAAGATGGCC GGCTCACCGA CGCTCAGGGA CGCACCATCT CGTTTCGTAA CACCTTGCTG
ATAGGCACCT CGAACCTTGG GTCCGAGTCA CTGATAAGCG ACCGCACGCC GGTCGGGTTT
ATCTACAGCG AAGATCCGGA CTATGAGGCA GCCCGTCGCA CCGTAATGAA CGAGGTGAAG
AAGTTCTTTA AACCCGAGTT TCTCAACCGA CTCGATGAGG TGATCGTATT TCACTATCTG
ACTCAGGAGG ATGTCCTCAA GATAGCCAAG TTGCTGATAT CATCGCTGTG TAAACAGATG
AAAGACAACG ATATCACCCT GCATATCGAC GCCGATGTGA TAGAGCGGGT AGCTCAGGAC
GGCTTCGAGC CCGCCTACGG TGCCCGCCCG CTAAGGAGAG AGATAGAGAA GCAGATAGAG
AATCCCATCG CCTCGCTTAT CGTCAACAAT AAAAATATTA CCGGCAGTGA AATTCACATC
AGTCTACACC ACAAGGGTAA GGCATTTAAT TTCAGGATTG AAGCGGGAGA GGAGAGCGAG
TAA
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| Protein sequence | MFQQYIRQCN QEVHKTLNAA IAELANAHQN VLTPEHILLG LLSLPGSEAA QLLQQILPDP
EKSIEALTRA VYHDHENTPL KGDTTQVVAA QEVEEIFGIA LSEAKRLGDA YIGTGSLLLA
LCDKRAGVTA IHLNNQGIKV GPAREALVKL RSGKTLDTPD AEGRSDPLDE YTQDLTEMAR
NNQLDPVIGR EDEIGRVIQT LSRRKKNNPV LIGEPGVGKT VIVEGLAQRI ANAEVPDTLR
DKRLLSLDLA ELVAGANMRG EFEERLKGVR DAVIEAKGQI ILFIDELHTV VGAGAGAGGL
DAPALLKSAL GRGTLQLIGA DTLDEYHRYV EADKALERRF QPILVREPSI EETIDILNGL
AGKYEGHHDI EYQPEALEAA ARLSERYIAD RHLPDKAVDL IDEAGADRHL HLLALSRPMK
ELERKRQALL SGKQKAYNEQ AFERVANMQT EILKLEQQLS LQREQQTTDT ASEDKAVNPE
DIARVVARLT GIPAARLAES EVEKLSHMED MLHKRIIGQQ DAVSAVANAI RRNRTGINRS
HRPIGSFLFL GPTGVGKTEL AKALAEFMLD DESRIVRLDM SEYMERHEVS KMIGAPPGYI
GYGEGGQLTE KVRRNPYTII LLDEMEKAHP DVFNMLLQIL EDGRLTDAQG RTISFRNTLL
IGTSNLGSES LISDRTPVGF IYSEDPDYEA ARRTVMNEVK KFFKPEFLNR LDEVIVFHYL
TQEDVLKIAK LLISSLCKQM KDNDITLHID ADVIERVAQD GFEPAYGARP LRREIEKQIE
NPIASLIVNN KNITGSEIHI SLHHKGKAFN FRIEAGEESE
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