| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3533 |
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| Symbol | |
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| ID | 5612063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4305052 |
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| End bp | 4306263 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934486 |
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| Product | acetyl-CoA acetyltransferase |
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| Protein accession | YP_001475265 |
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| Protein GI | 157376665 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGG TATATATTGT CGGTGCTAAA CGCACCGCAC TAGGTAGTTT CGGTGGAACT
TTAGCTTCTG TTCCAGCTTT TGAGCTTGGA GGTCACGCGA TTAAAGGGGC GATTGCTCAA
GCCGATATCT CTGCTCGCTG TATCGATGAG GTGGTAGTAG GTAATGTGTT GAGTGCGGGT
CAGGGCATGG GTCCTGGCCG ACAAGCCGCA CGTTTTGCAG GCATACCCGA TGAGGTTCCG
GCCTACTCTC TTAATATGAT CTGTGGCAGT GGTATGAAGA CGGTTATAGA AGCGGCCAGT
AAGATCAAAG CCGGTGATGC AGAGATCGTG GTCGCTGCGG GCATGGAGAA TATGTCTAGT
GCTCCATACC TCATGAGCAG CAATAACCGT TTCGGTGCCA AGATGGGTGA CCAAAAGCTA
GTTGATTCAA TGATCCATGA TGGACTGACA GACGTCTTCA ACCAGTATCA TATGGGAGTG
ACTGCCGAGA ATATTGCTAA CAAGTATGAG ATTAGTCGTG AGACTCAGGA TCAGTTTGCA
CTTCGGAGTC AGCAGAGGGC CTGTGCCGCT ATTGAGGCCA GACGTTTCGA AAATGAAGTC
GTGCCAGTTG AGGTGATGCT TCGTCGTAAG CCGGTGATGT TTAATCGTGA TGAGTACCCT
CGTACCGATG CCACAATTGA AAGTCTGGCT AAGCTGCGGC CCGCATTCGA TAAAAATGGT
TCGGTGACCG CGGGTAATGC TTCCGGGATT AATGACGGTG GTGTGGCATT TGTTATCGCA
TCACAAGAGG CGGTCGATGA GTATCAATTG CAACCATTGG CAGAGATAGT GAGCTACGGT
CAGGGGGGGC TCGATCCCGC GTATATGGGA CTTGGGCCTA TACCTGCGAT CAGACAGGCG
CTACAGCGTG CTGATATGCC TTTAGATAAG GTAGAACTCC TCGAGTTAAA TGAGGCCTTT
GCTGCTCAGG CGATAGGTGT GATGCATGGC CTTAGTGAAG AGCATGGCGT CTCGCTCGAC
TGGTTTGATA ATAAAACTAA CCTTAATGGT GGCGCCATTG CCTTAGGTCA CCCCCTAGGT
GCTTCCGGAG GACGCGTATT AACAACACTG CTCTATGAGA TGCAAAAGCA GCAGTGCAGT
TACGGACTTG CCTCCTTGTG TATAGGTGGG GGAATGGGAA CTGCGGTCAT CATCAAACGA
TGTGTAAATT AA
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| Protein sequence | MRKVYIVGAK RTALGSFGGT LASVPAFELG GHAIKGAIAQ ADISARCIDE VVVGNVLSAG
QGMGPGRQAA RFAGIPDEVP AYSLNMICGS GMKTVIEAAS KIKAGDAEIV VAAGMENMSS
APYLMSSNNR FGAKMGDQKL VDSMIHDGLT DVFNQYHMGV TAENIANKYE ISRETQDQFA
LRSQQRACAA IEARRFENEV VPVEVMLRRK PVMFNRDEYP RTDATIESLA KLRPAFDKNG
SVTAGNASGI NDGGVAFVIA SQEAVDEYQL QPLAEIVSYG QGGLDPAYMG LGPIPAIRQA
LQRADMPLDK VELLELNEAF AAQAIGVMHG LSEEHGVSLD WFDNKTNLNG GAIALGHPLG
ASGGRVLTTL LYEMQKQQCS YGLASLCIGG GMGTAVIIKR CVN
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