| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3495 |
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| Symbol | |
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| ID | 5609976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4259496 |
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| End bp | 4260275 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640934447 |
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| Product | CDP-diacylglycerol--serine O-phosphatidyltransferase |
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| Protein accession | YP_001475227 |
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| Protein GI | 157376627 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1183] Phosphatidylserine synthase |
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| TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000947375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00194912 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAATT TTGATAAAGA ATCAGTTAAG AGTAAAGGCA TCTATCTGCT ACCCAACCTG
TTTACTACTG CTGGGTTATT TTCAGGATTT TACGCTGTAA TTGCATCAAT GAATGGACAA
TTTGAATCTG CAGCCATTGC AGTCTTCGTT GCCATGCTCT GTGATGGCCT GGATGGGCGC
GTTGCCAGGA TGACTAATAC TCAGAGTGAG TTTGGTGCTG AATATGACAG CATGGCAGAT
ATGGTCTCTT TTGGTGTTGC CCCCGCCTTG ATCGCCTACA ATTGGGGGCT AGCTGATTTA
GGTAAGGTAG GTTGGCTTGC TGCTTTTATC TATTGTGCGG GAGCGGCTCT TAGGTTGGCT
CGATTCAATA CCCAAGTCGG AGTTGAAGAT AAAAGGTATT TTCAAGGTCT GGCAAGTCCA
GCCGCTGCTG CTCTTATCGC CGGCAGTATC TGGTTTGGTG GTCAAAGTGG GGTTGAAGGT
TCTGATGTTA GCTGGTTGGT GGCTTTAGTT ACGATAATTT CAGGTTTACT AATGGTAAGC
AATTTTCGCT ATCACTCATT TAAAGATTTC GACTGGCGCG GTAAAGTGAA TTTTATTGTC
ATTTTAATCG TTGTCGGAAT ATTTGTTTTC ATCTCGATAG AACCTGCGCT AATTTTATGC
TCAATTTTCT ATATCTACGC CTTATCCGGA CCCATTATAA CGATCTACCG TATTCGTAAG
CTGAAGCATC CTGCTACAGT TAATGATGAC TCTATGGTGA AAAAAGACGG TGAGGAGTGA
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| Protein sequence | MQNFDKESVK SKGIYLLPNL FTTAGLFSGF YAVIASMNGQ FESAAIAVFV AMLCDGLDGR
VARMTNTQSE FGAEYDSMAD MVSFGVAPAL IAYNWGLADL GKVGWLAAFI YCAGAALRLA
RFNTQVGVED KRYFQGLASP AAAALIAGSI WFGGQSGVEG SDVSWLVALV TIISGLLMVS
NFRYHSFKDF DWRGKVNFIV ILIVVGIFVF ISIEPALILC SIFYIYALSG PIITIYRIRK
LKHPATVNDD SMVKKDGEE
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