| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3490 |
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| Symbol | |
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| ID | 5613048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4248948 |
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| End bp | 4249214 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640934438 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475222 |
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| Protein GI | 157376622 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2921] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000408093 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTAGATA CAAAATTTGA TGAACTCATG GAGTTTCCAT GTGCATTTCC ATATAAAGTT
GTAGGTGACG CCAGTAGCAC GCTTGCTGAT AGAGTTGTGG AAGTCGTTCA ACGACATGTT
CCTGGCGACT ATGCGCCGAC ATCCAAAACC TCGAGTAAAG GAACGTACAA CTCAATCACT
ATTAGAGTTA CGGTGCAAAG CAAGGAACAG GTTGAGACCC TTTATACCGA ACTTGCTGCC
ATTGAAGGTG TTAAACGCGT TCTTTAA
|
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| Protein sequence | MLDTKFDELM EFPCAFPYKV VGDASSTLAD RVVEVVQRHV PGDYAPTSKT SSKGTYNSIT
IRVTVQSKEQ VETLYTELAA IEGVKRVL
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