Gene Ssed_3483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3483 
Symbol 
ID5612834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4241640 
End bp4241969 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content39% 
IMG OID640934431 
Productiojap-like protein 
Protein accessionYP_001475215 
Protein GI157376615 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000176434 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000377675 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGATAGCG CCGAGCTAAA GCAATTTGTA ATCGATAAAA TCGAAGATTT AAAAGCCAAA 
GATATTGTTA CATTAGAAGT ATCTAACCAG TCAAACATCA CCGATTACAT GGTGGTTTGT
TCTGGAACAT CTAAAACTCA CGTTAAAGCA ATCGCTGAAA ATGTAGTGGT TGAATCTAAG
CGTGCCAAGC TACACATTTA TGGTGTTGAA GGCCGTGAGA GCAGCGAGTG GGTATTAGTT
GACTTAGGTG ATGTAATTCT TCATGTCATG CAAGACAAGA CTCGTGATTT TTACGAACTT
GAGAAACTTT GGTCAGAAAA ACCAGCTTAA
 
Protein sequence
MDSAELKQFV IDKIEDLKAK DIVTLEVSNQ SNITDYMVVC SGTSKTHVKA IAENVVVESK 
RAKLHIYGVE GRESSEWVLV DLGDVILHVM QDKTRDFYEL EKLWSEKPA