| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3467 |
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| Symbol | |
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| ID | 5610237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4222492 |
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| End bp | 4223583 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934415 |
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| Product | GTP-dependent nucleic acid-binding protein EngD |
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| Protein accession | YP_001475199 |
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| Protein GI | 157376599 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000106228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.317822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTTA AATGTGGCAT CGTGGGCCTG CCAAACGTAG GTAAATCAAC GTTATTTAAT
GCATTAACTA AGGCTGGCAT CGAAGCGTCA AACTTCCCGT TCTGTACTAT TGAACCTAAC
ACCGGTGTGG TTCCTGTACC TGATGCGCGT TTAGATGCTC TGGCTGAGAT TGTAAACCCA
GAACGTATTT TACCTACCAC AATGGAATTT GTGGATATTG CCGGCTTGGT TGCTGGAGCA
TCAAAAGGTG AAGGCTTAGG AAACAAATTT CTGGCGAATA TCCGTGAAAC TGATGCAATC
GGTCATGTTG TACGTTGTTT CGAAGATGAC AACATTGTTC ACGTGGCTAA CAAGGTTTCG
CCAGTTGCCG ATATTGAAGT GATTAACACT GAACTTGCTT TAGCGGATCT TGATTCTTGT
GAACGCGCCA TTATGCGCCA AGCTAAGCGT GCCAAAGGTG GCGATCAAGA TGCTAAATTT
GAAGTGTCTG TGTTAGAAAA AATGCGTCCG GTACTGGATG AAGGTCATAT GTTGCGCTCA
ATGGATCTCT CAAAAGAGGA ACTGTTAGCG GTAGATTATT TGAACTTCCT GACACTTAAG
CCAACGATGT ATATTGCTAA CGTCTCTGAA GATGGCTTCG AAGACAATCC GCACCTCGAT
GCCGTTCGTG AAATCGCATC GCAAGAGAAT GCCGTTGTTG TTGCTGTTTG TGCAGCCATT
GAATCTGAAC TGGCAGAGAT GGACGCAGAA GATCGTGAAG AGTTTATGGC AGATCTTGGT
CTTGAAGAGC CTGGGTTAGA TCGTGTGATC CGTGCAGGTT ACGACCTATT GACTCTACAA
ACCTATTTTA CCGCTGGTGT AAAAGAAGTA CGCGCATGGA CTGTGCCTAT TGGCGCATCG
GCTCCTCAAG CCGCTGGTGT CATTCATACT GACTTCGAGC GTGGATTTAT CCGTGCACAA
GTTATGGCCT ATGAAGACTT CATTACCTAT AAAGGTGAGT CAGGTGCAAA AGAAGCGGGT
AAGTTACGTG TAGAAGGTAA GACATATGTA GTTAAAGATG GCGATGTGAT GCATTTCCTA
TTTAACGTAT AA
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| Protein sequence | MGFKCGIVGL PNVGKSTLFN ALTKAGIEAS NFPFCTIEPN TGVVPVPDAR LDALAEIVNP
ERILPTTMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI GHVVRCFEDD NIVHVANKVS
PVADIEVINT ELALADLDSC ERAIMRQAKR AKGGDQDAKF EVSVLEKMRP VLDEGHMLRS
MDLSKEELLA VDYLNFLTLK PTMYIANVSE DGFEDNPHLD AVREIASQEN AVVVAVCAAI
ESELAEMDAE DREEFMADLG LEEPGLDRVI RAGYDLLTLQ TYFTAGVKEV RAWTVPIGAS
APQAAGVIHT DFERGFIRAQ VMAYEDFITY KGESGAKEAG KLRVEGKTYV VKDGDVMHFL
FNV
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