| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3460 |
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| Symbol | hemA |
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| ID | 5613621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4211177 |
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| End bp | 4212457 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934400 |
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| Product | glutamyl-tRNA reductase |
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| Protein accession | YP_001475192 |
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| Protein GI | 157376592 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0373] Glutamyl-tRNA reductase |
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| TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000782916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATGCC TAGAGACCAG AACGAGTCAG ATGAGCCTTG TAGCAATCGG TATTAATCAT
AAAACAGCCA CGGTCGACCT ACGTGAGAAG GTAGCGTTTT CACCAGACAA AATTCATGAT
GCTATGAAAA GTCTGGCGAG TCGTACCAAG ACCGGAGAAG CTGTTATCAT ATCAACCTGT
AACCGAACTG AGCTTTACAC CAACACTGGT GATGAGGCCG AGGTTATTCG TTGGTTAGAA
GAGTATCACC AACTCTCCCA CGAAGACGTC GAGCCTTGCT TATATAAGTT TGAAGGCCAA
GCCGTTGCAC AGCATTTAAT GCGTGTATCT TCAGGTCTCG ACTCTCTAAT TCTTGGTGAG
CCTCAGATCT TAGGCCAGGT AAAGCAATCT TTCGTTAAGG CGAAGGAGGC GGGTAGCGTC
GCGATTACCA TGGACAGGCT TTTCCAAAAT ACATTTTCAG TAGCAAAAAA GATTAGAACT
GAAACAGAGA TCGGCGCTGC CGCCGTTTCT GTCGCTTTTG CTGCCGTGAG TATGGCCAAG
CATATCTTTT CATCCTTGAG TACCACAAAA GTGTTGCTTG TCGGTGCCGG TGAGACCATA
GAACTGGTTG CACGGCATTT GAAAGATAAT GGTGTCGACT CTATGGTGGT TGCAAACCGT
ACCCTTTCAC GTGCAGAAGG CATGTGTGAA GAGTTCGGTG CGACGGCAAT TACGCTGGAA
CAGATACCTG ATTATCTCCC GCAGGCCGAT ATCGTGATAT CATCTACCGC AAGCCCGCTA
CCTATCTTAG GTAAAGGCAT GGTAGAAAAA GCGCTTAAGC AGCGTCGTCA TCAACCTATG
TTGTTGGTTG ATATAGCTGT TCCTCGTGAT ATTGAAGCCG AGGTAGCAGA GCTGGACGAT
GCCTTCCTCT ATACAGTGGA TGACCTGCAA AGCATTATTG AACAGAATAT GGCCTCGCGA
AGAGAGGCTG CCGAGCAAGC GGAAGTAATT GCTGAAGAAC AATCGCATCT TTTCATGGAA
TGGGTCCGCT CCTTAGAGTC GGTCGACAGC ATTCGTGAAT ACCGTACAGC GAGTATGGCT
ATAAAAGATG AGCTGGTTGA GCGTGCAATC AATAAGTTAG CCCAGGGCGG AGACAGTGAG
AAATTACTAC TCGAACTGGC CAATAAGCTA ACTAATAAGT TGATCCACGC ACCGACTCAA
GCATTGACTG TTGCAAGCCG CCAAGGTGAT TTGAATAGCA TTGGCCAGCT TAGAACCGCG
CTCGGATTAG ATAAAAACTA A
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| Protein sequence | MRCLETRTSQ MSLVAIGINH KTATVDLREK VAFSPDKIHD AMKSLASRTK TGEAVIISTC
NRTELYTNTG DEAEVIRWLE EYHQLSHEDV EPCLYKFEGQ AVAQHLMRVS SGLDSLILGE
PQILGQVKQS FVKAKEAGSV AITMDRLFQN TFSVAKKIRT ETEIGAAAVS VAFAAVSMAK
HIFSSLSTTK VLLVGAGETI ELVARHLKDN GVDSMVVANR TLSRAEGMCE EFGATAITLE
QIPDYLPQAD IVISSTASPL PILGKGMVEK ALKQRRHQPM LLVDIAVPRD IEAEVAELDD
AFLYTVDDLQ SIIEQNMASR REAAEQAEVI AEEQSHLFME WVRSLESVDS IREYRTASMA
IKDELVERAI NKLAQGGDSE KLLLELANKL TNKLIHAPTQ ALTVASRQGD LNSIGQLRTA
LGLDKN
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