| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3449 |
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| Symbol | |
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| ID | 5610732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4198979 |
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| End bp | 4200517 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934389 |
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| Product | transporter |
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| Protein accession | YP_001475181 |
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| Protein GI | 157376581 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
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| TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATG AACAGGCAGC TCCGGGGAAA CTCGGACGAA TGTTAGATGG AATTGAAAGG
GTCGGTAACA AACTCCCCGA TCCTGCAATG CTGTTTCTTA TTTTACTCTT TGCGGTGTGG
GGGCTATCGG CACTGCTGTC TGGTGTCAGT TTTGAGGCCA TAGATCCCAG AACCAGTTCC
CCCATAGAAG TTAAAAACTT GCTGAGTGCT GAGGCGCTGA CTCACTTTCT AACCAGCATG
GTTAGTACCT TCATGGCCTT TGCACCACTG GGCGTGGTAT TAGTCGCTAT GTTAGGTGTA
GGTGTCGCTG AGCATTCTGG CTTTATTAAT ACCGCACTTA AGAAGATGCT CAAAGTCACC
CCGCTTAAAT TTTTAACGCC TGCAGTAGTT TTGGTAGGGA TTATCTCTCA TACCGCTACA
GATGCAGGTT ATGTGGTGGT TATTCCGCTT GCAGGGGTGA TTTTCTTTAC CGTAGGCCGT
CATCCGTTAG CGGGTATTGC AGCTGCTTTC GCCGGTGTAT CTGGTGGTTT CTGTGCTAAT
TTTATTCCGT CGGGTATCGA TCCGCTACTG CAAAGCTTTA CTCAGTCGGC AGCGCAAATT
GTTGACCCGG ATATTCAGAT TAACCCGTTG AACAACTGGT TCTTCGCCGC AAGTTCCTGC
ATTCCTATCG TGTTAATTAT CTGGTATCTG ACCGATAAGG TACTGGAGCC CAGGTTGAAC
CGTACTCATA AGGTTAATAC CGAAGAGGTC GATGTGCCTT CTATGGAAGA AAGCACACCT
AAAGAGGAGA AAGCATTTCG TGTTGCCACC TTTATTATGC TGACTGCTGT TATCGGCTTC
TTCTCGCTCA CTGTCTCTGA AACCTCAACA CTACGTGACG CTAATGGCTC GCTCACCAGT
TTCAGCGCCC CCTTAATGCA GTCAATCGTG CCGCTGATCT TCATCTTCTT TGTGATCCCC
GGGATGATTT ATGGTTATAT GACCGGCACC TTTAAAAACT CGATTGATGT CGTTCAAGCC
ATGTCTAAGT CGATGAGTGG AATGTCTCAC TATATCGTGA TGGCATTTTT CTGTGCTCAA
TTTGTGGCGG CGTTTTCAGC ATCAAACTTA GGAGCGCTAA TTGCGGTTGA AGGGGCAAGT
GGTCTTCAGG CGATGAATTT GTCAGCTGAA GTGACCATAG TTGGGTTGAT CATCTTAGTC
GCCTTCGTGA ACCTGTTTGT CGGTTCATCA TCGGCTAAGT GGGCCTTAAT TGGTCCGGTG
CTGGTGCCTA TGTTAATGCA ATTGAATATC AGCCCGGATC TGTCACAAGC GGCTTACCGT
GTCGGTGATT CCAGTTCCAA CATTATTACC CCGTTAATGC CGTACTTCCC ACTTGTCGTT
GTCTATTGTC AGCGCTACGT GAAAGATATC GGTATAGGTA CCCTCATCTC AATGATGTTA
CCTTTTAGTC TTTGTTTGCT TGCATTGTGG AGTAGTTGGT TACTGATTTA CTGGTCGATT
GGTATGCCAC TAGGCTTGGG GGCCAGTTAC ACTTACTAA
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| Protein sequence | MANEQAAPGK LGRMLDGIER VGNKLPDPAM LFLILLFAVW GLSALLSGVS FEAIDPRTSS
PIEVKNLLSA EALTHFLTSM VSTFMAFAPL GVVLVAMLGV GVAEHSGFIN TALKKMLKVT
PLKFLTPAVV LVGIISHTAT DAGYVVVIPL AGVIFFTVGR HPLAGIAAAF AGVSGGFCAN
FIPSGIDPLL QSFTQSAAQI VDPDIQINPL NNWFFAASSC IPIVLIIWYL TDKVLEPRLN
RTHKVNTEEV DVPSMEESTP KEEKAFRVAT FIMLTAVIGF FSLTVSETST LRDANGSLTS
FSAPLMQSIV PLIFIFFVIP GMIYGYMTGT FKNSIDVVQA MSKSMSGMSH YIVMAFFCAQ
FVAAFSASNL GALIAVEGAS GLQAMNLSAE VTIVGLIILV AFVNLFVGSS SAKWALIGPV
LVPMLMQLNI SPDLSQAAYR VGDSSSNIIT PLMPYFPLVV VYCQRYVKDI GIGTLISMML
PFSLCLLALW SSWLLIYWSI GMPLGLGASY TY
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