| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3402 |
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| Symbol | |
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| ID | 5609603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4145847 |
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| End bp | 4146308 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934342 |
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| Product | transcription elongation factor GreA |
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| Protein accession | YP_001475134 |
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| Protein GI | 157376534 |
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| COG category | [K] Transcription |
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| COG ID | [COG0782] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000615218 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACAGTTG TGGGTGCAGA GCGACTGCGT AAAGAATTAG ATTATTTAAA GTTTGAAAAG
CGTCCAGTGA TCGCTCAGGC AATTGGTGAA GCGAGAGAGC TTGGCGATCT GAAGGAAAAT
GCCGAATATC ATGCAGCACG TGAAGAGCAA GGTTTGTGTG AGGCGCGTGT ACGCGATATT
GAAGGCAAGC TCTCTAACGT GCAGATCATC GATGTGACTA AAATGCCAAA CACCGGCCGC
ATCATTTTCG GTACTACGGT GACAATTTTA AACATTGATA CCGATGTTGA AGTGACTTAC
CGCATTGTTG GTGAGGATGA AGCCGATATC AAAGAGAACC TTATTTCGGT AAGTTCACCT
ATTGCTCGCG GTTTGATCGG TAAAAACCTG GATGATGAAG TTAACATCGC AACACCAGGT
GGTATTACCG AGTATGAAAT TACCGCTGTC GAATACATTT AA
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| Protein sequence | MTVVGAERLR KELDYLKFEK RPVIAQAIGE ARELGDLKEN AEYHAAREEQ GLCEARVRDI
EGKLSNVQII DVTKMPNTGR IIFGTTVTIL NIDTDVEVTY RIVGEDEADI KENLISVSSP
IARGLIGKNL DDEVNIATPG GITEYEITAV EYI
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