| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3353 |
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| Symbol | |
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| ID | 5614226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4077966 |
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| End bp | 4079351 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934291 |
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| Product | nucleoside recognition domain-containing protein |
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| Protein accession | YP_001475085 |
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| Protein GI | 157376485 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3314] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAAACC GACAATTTAG AGTAAAAAAA GTGGCTGAAA AACAAACCCA TAACATAAAA
ACGATACTGA CATTTATTAT TCCGTCATTA ATAGGGCTAT TACTATTTAT GACACCTATC
AGCTATCAGG ACGCGATTAC CATTCCTATC GCTATCGTTT CAAAAGGCCT GCAGGCTCTC
CTTGGTGATG CATTAACTGC CATAGTGACT GGCGTGGTTG TTTTCACCGC GCTGGCATCA
GCGATGACCA AGTTACTGAA ACCTGCATTT ATCACTAGCA ATGCCTTTTT AAACTCTCTG
CTCAACATTT CACCTATGTG GCTATTAACC AGAATATTAG GTGCAGTGTT TATCTTACTG
ACATTTTCAG GTGTGGGTCC GGAAGCGATT CGCTCAGGAG ATACCGGCGC GCTGGTCTTG
AACGACCTAC TTCCGGTACT GTTTTGTGTG TTTATATTCG CTGGAATGTT ACTGCCACTC
CTGCTTAATT TTGGTTTGCT GGAGCTATTC GGCACCATGT TAACCAAAAT AATGAGACCC
ATATTCAATC TGCCGGGACG TAGTGCCATC GACTGTATGG CTTCCTGGCT TGGCGACGGT
AGTGTAGGGA TCTTGATGAC GAGCAAGCAG TACGAATCTC GTCTCTATAC TCAAAGGGAA
GCTGCGGTAA TTGGTACCAC ATTCTCGGCC GTGTCTATTA CCTTTTCTTT AGTGGTTATC
TCCCAGGTCA GATTAGAACA CATGTTCGTC CCCTTCTACC TGACGGTTTG TTTGGCTGGT
ATTATGGCGG CTATTATCGT GCCTAAGCTG CCCCCCTTAT GTTGGAAAAA AGACAAGTAT
ATTGACGATA CTCCAAGGCA TCCTGATGAC GAAGTGATCC CTGACGGGCA CGGTGTTTTC
TCTTGGGGAC TCGATCAGGC GCTCAATAAG GCATCGAAAG CCGGCGGGAT CAAACATACG
CTCACAGATG GCCTTAAAAA TGTCATCGAT ATGGTATTTG GTGTCATACC AGTCGTTATG
GCCATAGGCA CAGTTGCCTT GATTATCGCC GAATATACGC CGATATTTGA TTATCTGGGT
ATGCCTTTCA TCCCACTACT CGAGCTATTG CAAGTTCCGG AGGCGACTGA GGCATCAAAA
ACCATCGTGG TTGGCTTTGC TGATATGTTT ATTCCTTCAA TTCTGGCAAG CTCAATCGAG
TCAGATATGA CGCGTTTTGT CATTGCGGCA ATGTCAGTCA CTCAGCTTAT CTACATGAGT
GAAGTGGGTG CCTTACTTCT TGGCAGTAAA ATACCGGTCA ATATCTTCGA GCTATTTGTC
GTATTCATTT TACGTACTCT GGTCACCTTA CCTATCATTG CCGGTGTTGC TCACCTGATC
TTCTAG
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| Protein sequence | MPNRQFRVKK VAEKQTHNIK TILTFIIPSL IGLLLFMTPI SYQDAITIPI AIVSKGLQAL
LGDALTAIVT GVVVFTALAS AMTKLLKPAF ITSNAFLNSL LNISPMWLLT RILGAVFILL
TFSGVGPEAI RSGDTGALVL NDLLPVLFCV FIFAGMLLPL LLNFGLLELF GTMLTKIMRP
IFNLPGRSAI DCMASWLGDG SVGILMTSKQ YESRLYTQRE AAVIGTTFSA VSITFSLVVI
SQVRLEHMFV PFYLTVCLAG IMAAIIVPKL PPLCWKKDKY IDDTPRHPDD EVIPDGHGVF
SWGLDQALNK ASKAGGIKHT LTDGLKNVID MVFGVIPVVM AIGTVALIIA EYTPIFDYLG
MPFIPLLELL QVPEATEASK TIVVGFADMF IPSILASSIE SDMTRFVIAA MSVTQLIYMS
EVGALLLGSK IPVNIFELFV VFILRTLVTL PIIAGVAHLI F
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