| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3317 |
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| Symbol | |
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| ID | 5614141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4031879 |
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| End bp | 4034752 |
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| Gene Length | 2874 bp |
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| Protein Length | 957 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934255 |
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| Product | peptidase S9 prolyl oligopeptidase |
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| Protein accession | YP_001475049 |
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| Protein GI | 157376449 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.13719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTT GGGTTTACGT TAATAAAATA AGAAAAATGA GGAAGACCTT GAAGTCACTA
CCCATAGCAT CTTTTATTCT TGCATCGGCG AGCCTGCTCA CTGCCGGAGC CTACGCTTCA
TCCCCCTCCA ACTCTCATTC AATCGTGCCT GATGACATTA TGCATTTTGA ATCATTGAAG
AAACCTGTGG TTTCAGATTC CGGCACTATG TTGGCCGTCG AGGTGGCTCC CGATCGGGGT
GATAGTCATG GACTGGTTAA GAGTCTGACA TCGTCCAAAA AGTTTACTGT AGATGGCGGT
TCTAAGCCTA AAGTGAGCCG AGACGGCCGT TTTGTTGCTT TTGTTGTGAA AAATTCGTTA
CTCGATTCTG AGATGGCATC TGCCAAAGAG AAGAAAAAAC TCAAATCCGG CATGGTGTTA
CTCGACACTA CATCCGGAAT AGAAACGCGT TTTGAAAGAG TTAAAACGTT TGAGTTTAAT
GAAACCGGAA CACACTTAGC CGTTTGGTTT GAAGCCGAAG AGAAAGAGGG TGATAGTAAA
AAAACCGATA AAAACGCCGA CAGTAAGAAA AAAGAGCAGA AAAGTAAGCA GGAAAAAGTT
GATAAGTTCG ATAAGGGAAC CGAGTTTCAG CTTATCTCAC TTAAAAATGG CTATAAGCAA
AGCGTTAAAA ATGTGACCCG CTTCTATTTT GATAAAGTAG GTAAGCATCT GGTGCTGGCA
AGCAATGATG TGAAATTGAA AAAGCATCAA CTGGTATCAA TAAAACTCAA TAGCAACGAA
AAAGAGATTG TACGTCAGTA CAGTGACCAA CAGATTGGTG AGGTATCGCT GAGTGAAGAC
GGCCGATACA TCGCCTTCAC CCACGGCGTG GCAGCAAGTG CACCCTATGG GCGTGAATAT
AAGTTGTCTC TGCTTGAGAT AGCAACCGGA GTCGTTAAAC CTGCACCCGT TAATGATGAG
TGGAAACTTA ATCGTTATAC CACATTGAGA TTTTCACAAG ACAGTAACCG ACTCTTTTTT
GGACGGGTTC CCCATGTGAG CCAACAGCTT GAGATCAAAA AGATTGAGAA CCAAGCCGAC
CTCTTTAACG AAAAGATAGT CACAGGTCAG CGTGAGCTGC GTATCTGGCA CGGTGATGAC
GCACGTATTA AGCCCAATGA GGTAAAACAG TACAAGAAGG AGCAGGAACG GACCTATTTG
GCCGTTTTAC ATCTGCAGGG AAACAACCTT GTGCAGTTAG CCGATGAAGC TGTACCGGAC
ATTGAGCTGC AGGAGCAGTC ACGATTCGTT ATTGCCAGCT CGGATATTCC CTATCGTAAG
ATGATCACCT GGGCCGGTTT TTATCGGGAC TATTATCTGG TCGATCTTAA TACGGGTCGC
AAAATTCCAT TCTTGACTCA GCAGCCCACA AATGAAGCGC CAAACCTCTC TCCTAAGGAG
CGATTTGTCT CTTACTACCA GCAAGGGCAA GTGTATCTCT ATCAGATTTC CCAAGATCGC
AGACATAATC TAACCAAAGA TTTGAAGGTC TCTTTTGCCG ATGAGGACCA TGATTATCCC
TCTAATGCCC CTGGATATGG CTTTGGCCCC TGGCTAGAGA ATGATGCCGG TCTATTGGTT
TATGATAAAT ATGATATCTG GCAGATGAAT ACAGAATCTC TGGAGGCGTT CAAGCTTACG
GCGGGTAAAG GACGTAAGCA GGGGATCCAA TATCGAGTCA CCGGCTTAGT GGAGGATGAG
AATAGCCCCG ATCTCTTTGC TATCGATCAG CAGGTGCTGC TCCATGGCTA TAACGAGAAG
ACCAAAGGTG ACGGTTATTA TCAGGCAAAA ATTGGTGTCT CCGGTGTGAC AACCTTGATG
GAGGGGGATT ATAAGATAAA ACCTCTCGCA CGCAGCAAAG ATTCCAATAC CTTAGTGTTC
TCGAAAGAGC GCTTCGACCT GTTTCCGGAT CTCTATACCG CAGAGTACTC AGCGCCACAG
GCAGCGACCC GTCAAACCGA CTTGGATGCT CAGAAGCGTA AATTTAATTG GAGTCAGTCT
GAGCTGGTTC ACTGGACCAA TGGTGATGGA CAGCCGTTAG ATGGTGTGTT GATTAAGCCG
ACAAACTATG AAGAGGGCAA GCGCTATCCG GTACTGGTCT ATTTCTACCG TTTTATGAGT
GACCGCTTGC ATGCCTTTCC CCAGATGAAA CTCAACCATA GACCTAACTT TGCCTGGTAC
GCCGATAACG GTTATGCCAT CTTCCTGCCG GATATTCGTT TCGAGGTGGG TTATCCCGGT
GCAACCTCTG TTCAGGCATT GACGTCCGGT GTGCAGAAGT TGATCGAAAT GGGTATCGCA
GACCCCGATG CTGTCGGGAT CCAGGGACAC TCCTGGGGCG GTTATCAAAC AGCCTTTGCC
GTCACGCAGA CTCATATCTT TAAGGCTGCG GTAACCGGGG CTCCGGTCTC TAACATGACC
AGCGCCTATA GCGGGATCCG TCATGGTAGT GGTTTGGCTC GTCAGTTCCA GTATGAAACC
GGACAGAGCC GAATTGGTGA GAGCCTGTTC AGAGCGCCGC AGAAGTATAT TGAGAATTCG
CCTGTTTTCT ATGCTGAACG TATCAAGACG CCTATGATGA TCATGTTTGG CGATAAAGAC
GATGCGGTGC CTTGGGAGCA GGGAATAGAG CTTTATCTCG CCATGCGCCG TGCGGGTAAA
GATGTGGTCT TTTTGCAATA TCAAGATGAA CCACATCACT TGAAGAAGTA TCCGAATAAG
CTCGATTACA GCATTCGTAT GATGGAGTAC TTCGACCACT ATCTGAAGGG CAAACCCGCA
CCTGCCTGGT TAACTCAGGG CGAGGCATAT ACCGAATATA AGAAGGCCGA CTAA
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| Protein sequence | MKAWVYVNKI RKMRKTLKSL PIASFILASA SLLTAGAYAS SPSNSHSIVP DDIMHFESLK
KPVVSDSGTM LAVEVAPDRG DSHGLVKSLT SSKKFTVDGG SKPKVSRDGR FVAFVVKNSL
LDSEMASAKE KKKLKSGMVL LDTTSGIETR FERVKTFEFN ETGTHLAVWF EAEEKEGDSK
KTDKNADSKK KEQKSKQEKV DKFDKGTEFQ LISLKNGYKQ SVKNVTRFYF DKVGKHLVLA
SNDVKLKKHQ LVSIKLNSNE KEIVRQYSDQ QIGEVSLSED GRYIAFTHGV AASAPYGREY
KLSLLEIATG VVKPAPVNDE WKLNRYTTLR FSQDSNRLFF GRVPHVSQQL EIKKIENQAD
LFNEKIVTGQ RELRIWHGDD ARIKPNEVKQ YKKEQERTYL AVLHLQGNNL VQLADEAVPD
IELQEQSRFV IASSDIPYRK MITWAGFYRD YYLVDLNTGR KIPFLTQQPT NEAPNLSPKE
RFVSYYQQGQ VYLYQISQDR RHNLTKDLKV SFADEDHDYP SNAPGYGFGP WLENDAGLLV
YDKYDIWQMN TESLEAFKLT AGKGRKQGIQ YRVTGLVEDE NSPDLFAIDQ QVLLHGYNEK
TKGDGYYQAK IGVSGVTTLM EGDYKIKPLA RSKDSNTLVF SKERFDLFPD LYTAEYSAPQ
AATRQTDLDA QKRKFNWSQS ELVHWTNGDG QPLDGVLIKP TNYEEGKRYP VLVYFYRFMS
DRLHAFPQMK LNHRPNFAWY ADNGYAIFLP DIRFEVGYPG ATSVQALTSG VQKLIEMGIA
DPDAVGIQGH SWGGYQTAFA VTQTHIFKAA VTGAPVSNMT SAYSGIRHGS GLARQFQYET
GQSRIGESLF RAPQKYIENS PVFYAERIKT PMMIMFGDKD DAVPWEQGIE LYLAMRRAGK
DVVFLQYQDE PHHLKKYPNK LDYSIRMMEY FDHYLKGKPA PAWLTQGEAY TEYKKAD
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