Gene Ssed_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3173 
Symbol 
ID5611144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3831663 
End bp3832310 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content44% 
IMG OID640934111 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001474905 
Protein GI157376305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATG CTGAAGACCA ACAATTAGAA CAGTTTCGAG CCGTTTATCT TACTGCTGAA 
GATCTGCGAG TTGCAGCTTC TATACTCTAT AACGCTTACC ATGATGATCC ATTTTTTTTC
GATGCCCTGT ATGGGGGCGA TCTCGCGATG TACGAACAGA AGCTTAGAGG GGCGATTCGT
GAGGAACTGA ACGAATTATG GCAACAGGAG CAGGCCTTAA TCGGGTTGTT TGATGATGAT
CGCATGGTCG GTGTTGCTTG CATCGTCACA CAACAAGTGC CTTTAGGGGA GGCGAGATAC
TGGCATTGGC GTTTAAAGAT GTTAATCAGT ACGGGTTGGC AATCGACTCA GGCTTTAATA
AATAAAGAGG CCTGTTTGTT AGAGCATCTG CCTAGTCCAC GTTGTGGCAT TTTACAATTT
ATTGCCGTAT CACCAACCGA GCAGAATAAG GGCTTAGGAA GCCAGCTTGT TGAAGCTGTC
TTGAGTTGGT GTGATGAGCA ACCTGAACTC GATGGGATAG GGGTGTTTGT TAGTGAATCC
AGTCATGCAC AACTATTTAG TAAGCATAGT TTTGCCCTTT TAGAAGCCAT ATCCATAGGA
AATGTAGAAG GGGAGTTACT CTTTTATCGA GGACACGAAA ATGAGTAA
 
Protein sequence
MTNAEDQQLE QFRAVYLTAE DLRVAASILY NAYHDDPFFF DALYGGDLAM YEQKLRGAIR 
EELNELWQQE QALIGLFDDD RMVGVACIVT QQVPLGEARY WHWRLKMLIS TGWQSTQALI
NKEACLLEHL PSPRCGILQF IAVSPTEQNK GLGSQLVEAV LSWCDEQPEL DGIGVFVSES
SHAQLFSKHS FALLEAISIG NVEGELLFYR GHENE