Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3173 |
Symbol | |
ID | 5611144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3831663 |
End bp | 3832310 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640934111 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001474905 |
Protein GI | 157376305 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATG CTGAAGACCA ACAATTAGAA CAGTTTCGAG CCGTTTATCT TACTGCTGAA GATCTGCGAG TTGCAGCTTC TATACTCTAT AACGCTTACC ATGATGATCC ATTTTTTTTC GATGCCCTGT ATGGGGGCGA TCTCGCGATG TACGAACAGA AGCTTAGAGG GGCGATTCGT GAGGAACTGA ACGAATTATG GCAACAGGAG CAGGCCTTAA TCGGGTTGTT TGATGATGAT CGCATGGTCG GTGTTGCTTG CATCGTCACA CAACAAGTGC CTTTAGGGGA GGCGAGATAC TGGCATTGGC GTTTAAAGAT GTTAATCAGT ACGGGTTGGC AATCGACTCA GGCTTTAATA AATAAAGAGG CCTGTTTGTT AGAGCATCTG CCTAGTCCAC GTTGTGGCAT TTTACAATTT ATTGCCGTAT CACCAACCGA GCAGAATAAG GGCTTAGGAA GCCAGCTTGT TGAAGCTGTC TTGAGTTGGT GTGATGAGCA ACCTGAACTC GATGGGATAG GGGTGTTTGT TAGTGAATCC AGTCATGCAC AACTATTTAG TAAGCATAGT TTTGCCCTTT TAGAAGCCAT ATCCATAGGA AATGTAGAAG GGGAGTTACT CTTTTATCGA GGACACGAAA ATGAGTAA
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Protein sequence | MTNAEDQQLE QFRAVYLTAE DLRVAASILY NAYHDDPFFF DALYGGDLAM YEQKLRGAIR EELNELWQQE QALIGLFDDD RMVGVACIVT QQVPLGEARY WHWRLKMLIS TGWQSTQALI NKEACLLEHL PSPRCGILQF IAVSPTEQNK GLGSQLVEAV LSWCDEQPEL DGIGVFVSES SHAQLFSKHS FALLEAISIG NVEGELLFYR GHENE
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