Gene Ssed_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3150 
SymbolfabZ 
ID5610181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp3806398 
End bp3806859 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content45% 
IMG OID640934088 
Product(3R)-hydroxymyristoyl-ACP dehydratase 
Protein accessionYP_001474882 
Protein GI157376282 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.30867e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0214568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAAATC AATTAAATAC CATGGATATC AAAGAAATCA TGAACTCTTT GCCCCATAGG 
TACCCATTCT TATTGATCGA TCGTGTATTA GACTATACTC CGGGTGAGAC GCTTCATGCG
ATCAAGAACG TCACTATCAA TGAACCTTTC TTCCAGGGAC ATTTCCCGAT CCAACCAGTG
ATGCCTGGCG TATTAATTCT GGAAGCGATG GCGCAGGCAA CAGGCTTGTT AGCTTACAAG
ACAATGGAAG CTGCTGTTAC TGATGATTCC TTGTATTATT TTGCCGGTAT CGATAAGGCG
CGTTTTAAGC GAGTTGTCGA GCCAGGTGAT CAGTTACACT TTGAAGTGAA GATGGTAAAA
GAACGCCGTG GGATTGGGGT GTTTACTGGT GTAGTTAAGG TTGACGGCGA GTTAGTTTGC
TCGGCGGAAA TCATGTGTGC TCGCAGAGAG ATCAAAAAGT GA
 
Protein sequence
MSNQLNTMDI KEIMNSLPHR YPFLLIDRVL DYTPGETLHA IKNVTINEPF FQGHFPIQPV 
MPGVLILEAM AQATGLLAYK TMEAAVTDDS LYYFAGIDKA RFKRVVEPGD QLHFEVKMVK
ERRGIGVFTG VVKVDGELVC SAEIMCARRE IKK