| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3147 |
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| Symbol | rnhB |
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| ID | 5610178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3803736 |
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| End bp | 3804377 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934085 |
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| Product | ribonuclease HII |
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| Protein accession | YP_001474879 |
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| Protein GI | 157376279 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0164] Ribonuclease HII |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.236655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0126167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGTAT TCAAAGCTAT CACTACCGAA CAAGTTGAAA TCTTAACTGC TGGACTCTAT
GCCGGGGTCG ATGAAGTGGG CCGCGGCCCC TTGGTTGGTA ATGTGGTTAC CGCTGCGGTT
ATCTTGGATC CAACTAAGCC GATTACCGGC TTAAATGATT CAAAGAAACT CTCTGAAAAG
AAGCGTGAAG CCTTGTTTAC TGAGATCCAC GAAAAAGCAT TGGCTATCAG TATTGGCTAC
GCATCACCCG AAGAGATAGA TGAGCTCAAT ATTTTACATG CGACCATGTT AGCCATGCAG
CGAGCCGTTG CTGGTCTGGA TATGGCACCG ACAAGTGTTT TGGTGGATGG TAATCGTACT
CCCGATTTTT CCCATGGGGA AGACACCGAT AGGAATATTG AGAGTCATGC CATTATTAAA
GGGGATGGGT TAGTTGCCGG TATCAGTGCC GCCTCTATCG TTGCCAAAGT GATCCGTGAC
AGAGAGATGG ATCTACTCGA TATGGAACAC CCTCAGTATG GTTTTGCCAA GCATAAAGGG
TATCCTACCA AGGCGCATTT CGAAGCATTA GCGTTACATG GCGTGTTGCC TGAACATAGA
AAAAGCTTTC GTCCGGTCAA AGAGCGCCTC GCTAAAAATT AA
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| Protein sequence | MAVFKAITTE QVEILTAGLY AGVDEVGRGP LVGNVVTAAV ILDPTKPITG LNDSKKLSEK
KREALFTEIH EKALAISIGY ASPEEIDELN ILHATMLAMQ RAVAGLDMAP TSVLVDGNRT
PDFSHGEDTD RNIESHAIIK GDGLVAGISA ASIVAKVIRD REMDLLDMEH PQYGFAKHKG
YPTKAHFEAL ALHGVLPEHR KSFRPVKERL AKN
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