| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3117 |
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| Symbol | |
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| ID | 5611014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3757252 |
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| End bp | 3758391 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934055 |
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| Product | alkaline phosphatase |
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| Protein accession | YP_001474849 |
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| Protein GI | 157376249 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.768949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATT ATGAAATGTT AAGATTGATC TGGTGGGCAC TGATTGGTGT GCTATTCATC
GGGTTTGCTG TAACTGATGG TTTCGATATG GGAGTTGGCG CACTTTTGCC TATCATAGGT
AAAGATGACA CCGAACGCCG TATCATGATC AACTCGATTG CTCCACATTG GGATGGTAAC
CAGGTTTGGT TAATTACTGC AGGTGGCGCA CTGTTTGCTG CTTGGCCTAT GGTTTACGGT
GTATCGTTCT CAGGATTCTA TGTCGCTATG ATGTTGGTCT TGTTTGCATT ATTCCTTCGT
CCTGTTGGCT TCGATTACCG TTCAAAAATT GAAGATCCAA GATGGCGTAA GTCTTGGGAT
TGGGCGTTGT TTGTCGGTGG TTTTGTTCCT CCGCTGATCA TTGGTGTTGC TTTTGGTAAC
CTATTGCAAG GTGTGCCGTT TAACTTTGAC GAATACCTTC GTGCAACGTA CCACGGTGGC
TTCTTCGGTC TACTGAACCC GTTTGGATTA CTGGCAGGTC TGGTGTGTGT CAGCATGTTT
ATGATGCAAG GTGCGACCTG GTTACAGATG AAGACTGAAG GTGAGTTGAG AGTTCGTGCT
GCTAAGGCCG CTCAAGTATT ATCAGCCTTG TTATTCGTCT TCTTTGGTGC AGCTGGTGTC
TGGCTGGTTA ATGGCATCGA TGGTTATGTG ATCACTTCAA CCATAGATAC TTATGGCATC
TCAGATCCAA CGCTTAAGAC GGTTGCCGTC GAAGCGGGGG CATGGTTGGC TAACTACGAC
AAGTACCCTA TTACTATGTT GTTCCCAGTC ATTGGACTGG CTATGCCTAT CTTAGTCCTG
CTGTCGAGCC GTCTAAACCG TAGTGGTTTC GCCTTCTTCT TCAGTTCACT GGCGATTGCC
GCCGTGATCT TAACTTGTGG TGCGGCTATG TTCCCATTTG TTATGCCATC TTCACTCGAG
CCAAACGTGA GTTTGACTAT GTGGGATGCG ACTGCAAGTG AAATGTCGCT GACTGTTATG
ACTTGGGCTG CAATCATCTT CGTACCTATT GTACTTAGCT ACACTGTGTA CACTTATTTG
AAGATGTTTG GTCGTCTATC TCGCAGCTTT ATCGAGAATA ACAAGACATC ACTTTACTGA
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| Protein sequence | MFDYEMLRLI WWALIGVLFI GFAVTDGFDM GVGALLPIIG KDDTERRIMI NSIAPHWDGN
QVWLITAGGA LFAAWPMVYG VSFSGFYVAM MLVLFALFLR PVGFDYRSKI EDPRWRKSWD
WALFVGGFVP PLIIGVAFGN LLQGVPFNFD EYLRATYHGG FFGLLNPFGL LAGLVCVSMF
MMQGATWLQM KTEGELRVRA AKAAQVLSAL LFVFFGAAGV WLVNGIDGYV ITSTIDTYGI
SDPTLKTVAV EAGAWLANYD KYPITMLFPV IGLAMPILVL LSSRLNRSGF AFFFSSLAIA
AVILTCGAAM FPFVMPSSLE PNVSLTMWDA TASEMSLTVM TWAAIIFVPI VLSYTVYTYL
KMFGRLSRSF IENNKTSLY
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