Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3098 |
Symbol | |
ID | 5613072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 3735747 |
End bp | 3736904 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640934036 |
Product | UDP-bacillosamine synthetase |
Protein accession | YP_001474830 |
Protein GI | 157376230 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAT TAATAGAGTT TATTCGAGAA ACCTATCAAA CCAATGAGTT TATTCCTCTG CATGCCCCGA CATTCCCAGG CAATGAACAG GCGTATGTCG CGGAGACAAT AGCCAGTACC TTTGTGTCGA GTGTTGGCAA GTTTGTCATC GATTTCGAAC ACAAGATTGA ATCTTTTACC GGTTCACCTA AAGCGGTTGC CACTTCCAGT GGCTCCAGCG CCTTGCATAC CGCCTTGTAC ATGGCAGGGG TAACAAGTGG GGATCTGGTT ATCACTCAAG CCCTCACTTT TGTGGCTACC TGTAATACCT TATACCACAT GGGCGCAGCC CCAATTTTTG TCGACATTGC AAAAACAAGT TTAGGCTTAT CTCCCCACGC CGTTCAAGCG TATCTGGAAG AATATGGGGT TATCGATGAG CATGGCTTGT GTACCCACAA GGAGACGGGG CAAATTATTA GAGCCCTGCT GCCTATGCAT ACTTTCGGTC ATCCAGTGGA GCTGGATGAA TTAGCCGTCA TTTGCCATCG ATGGAATCTG GTTTTAATCG AAGATGCAGC CGAAAGCCTA GGGTCATTCT ATAAAGGAAA GCATACGGGC ACGGTGGGAG ATTTCGCTGC ACTGAGTTTC AACGGCAACA AAATTATCAC CACAGGTGGT GGCGGGATGT TACTTGCAAA TAGTCAAAGC AGTGGCGAGC GAGCCAAGCA TATAACAACG ACCGCTAAGG TGCCCCACCC TTTTGAATTT TACCATGATG AACCAGGTTT TAACTACCGA ATGCCAAACC TGAATGCTGC ACTTGGCTGT GCTCAGATGG AAAGCCTTCC CCTGTTTATC GAACAGAAGC GAGCACTGGC AAAGCACTAT CAGACTTTCT TTAGCAATAG CGAGCTGCAG TTTGTTCATG AGCCTAGTTA TGCCAAGTCT AACTATTGGC TTAATGCGGT CATTTGTCCC GATACACAGA GTCGTGACAG ACTACTTAAG TCGACAAATG ATAATGGTGT GATGACACGA CCAGTGTGGC AGCTCATGCA TCGCCTCCCT ATGTTTAAAG ATGCGGTGCG CGGCTCGTTA ACAAACTCTG AATTAATCGA ATCTCGTCTT ATCAATCTAC CTAGCTCTCC AGCGACAATA GGATTAACCC ATGCCTAG
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Protein sequence | MKSLIEFIRE TYQTNEFIPL HAPTFPGNEQ AYVAETIAST FVSSVGKFVI DFEHKIESFT GSPKAVATSS GSSALHTALY MAGVTSGDLV ITQALTFVAT CNTLYHMGAA PIFVDIAKTS LGLSPHAVQA YLEEYGVIDE HGLCTHKETG QIIRALLPMH TFGHPVELDE LAVICHRWNL VLIEDAAESL GSFYKGKHTG TVGDFAALSF NGNKIITTGG GGMLLANSQS SGERAKHITT TAKVPHPFEF YHDEPGFNYR MPNLNAALGC AQMESLPLFI EQKRALAKHY QTFFSNSELQ FVHEPSYAKS NYWLNAVICP DTQSRDRLLK STNDNGVMTR PVWQLMHRLP MFKDAVRGSL TNSELIESRL INLPSSPATI GLTHA
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