| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3084 |
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| Symbol | flgE |
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| ID | 5611474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3721649 |
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| End bp | 3723013 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934021 |
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| Product | flagellar hook protein FlgE |
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| Protein accession | YP_001474816 |
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| Protein GI | 157376216 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.901085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTTA ACATCGCATT GAGTGGTATC GCTGCAGCGC AGAAAGATTT GAATACCACG
GCAAATAATA TTGCTAACGT CAATAGTATC GGCTTTAAAG AGTCCAGAGC TGAATTTGCA
GATGTGTATG CAAACTCAAT TTTTGCTAAC AGTAAGACTG GCGTAGGTGG CGGCGCAACC
ACCAGTCACG TGGCGCAGCA GTTCCATCAG GGAAGTTTGC AATTTACCAA TAATGCGCTG
GATATGGCGA TCAATGGCGG CGGCTTCTTT GTCACCTCAT CGGGTTTTAG CTCTCAAGAC
TTAAGCTATA CCCGAGCCGG TGCGTTTAAA GTTGACTCTA ATAGCTACCT TGTAGACTCT
CAAGGGAATT TTCTGCAAGC GTTCGAGGTG GATAAAGACG GAAACTCAAC CTCTGTCAGT
TTAACCGAGA CCAAGCCTGT CAGGATCCCC GACACCGCTG GTAGCCCCAA GAAAACTGAG
AACGTCGGTA TACAGATGAA CCTCAATGCC GGGGATGGAA CTAAAGATCC CGCTCTATTC
GATCCCTCTG ATCGTGATAC CTATAACAAC TCTACCGCGG TCACAATGTA TGACTCATTA
GGTGAACCGC ATGTGATGAC CACTTATTTC GTTCGACCCA ATAACGCTGC ATATAATCTG
GAAAGCAACT GGGTTGCCTT CTATGCGGTA GATGGAAAGC AGGTGGATAT AGCTGGTCCT
GTTGTTAATT ATGATACCGA TACTAGTGGC AATGGTACTG TTGATGGTAA TGCACCAGCG
CAAGCGACGC TTGGTAACTG GAAAGGTTCT GTGATCAAGT TTAACGAATT AGGTTCTCAT
ACGACGACCG ACCCCGCAAC GATTATCACA GAGACCTTAG GTAATGGCGG CGCCGATGTT
CTGGGTCCTG GCACCGATGG TTCACAAGCC TTGACCATAG ACTTTGATAA TCCGACTCAA
TATGCATCGG CCTTCGAAGT GACCGAGTTA ACCCAGGATG GCACCACGGT TGGCCGTTTA
ACGAATGTCG AGGTCGGCGC CGATGGTCTG ATCAACGCCA GTTACAGTAA TGGTGCGACG
GTAGCGCTGG CAAGGGTGGC CTTGGCGCGT TTTGCTAATG AGCAGGGACT GACGCAGGTG
GGTAATACCT CATGGAAAGC CAGCCTCGAC TCAGGCGCTG CGCTCGCCGG TGAGGCAAAT
AGCGGTACCT TCGGTAGTAT TCGTTCATCG GCACTGGAAC AGTCGAATGT CGATCTGACC
ACCGAACTTG TGGATCTTAT CTCTGCTCAA CGAAACTTCC AGGCGAACTC GAGAACGCTT
GAGGTGAATA ACACCCTGCA GCAGACCGTG TTGCAGATCA GGTAA
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| Protein sequence | MSFNIALSGI AAAQKDLNTT ANNIANVNSI GFKESRAEFA DVYANSIFAN SKTGVGGGAT
TSHVAQQFHQ GSLQFTNNAL DMAINGGGFF VTSSGFSSQD LSYTRAGAFK VDSNSYLVDS
QGNFLQAFEV DKDGNSTSVS LTETKPVRIP DTAGSPKKTE NVGIQMNLNA GDGTKDPALF
DPSDRDTYNN STAVTMYDSL GEPHVMTTYF VRPNNAAYNL ESNWVAFYAV DGKQVDIAGP
VVNYDTDTSG NGTVDGNAPA QATLGNWKGS VIKFNELGSH TTTDPATIIT ETLGNGGADV
LGPGTDGSQA LTIDFDNPTQ YASAFEVTEL TQDGTTVGRL TNVEVGADGL INASYSNGAT
VALARVALAR FANEQGLTQV GNTSWKASLD SGAALAGEAN SGTFGSIRSS ALEQSNVDLT
TELVDLISAQ RNFQANSRTL EVNNTLQQTV LQIR
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