Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3076 |
Symbol | |
ID | 5611645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3712762 |
End bp | 3713583 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640934013 |
Product | flagellin |
Protein accession | YP_001474808 |
Protein GI | 157376208 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATTA CGGTAAATAC CAATGTGACT TCACTGAAGG CACAGAAAAA CCTGAATGTT TCTAGTGGTG CTTTGGCGAC TTCGATGGAG CGATTATCGA GTGGTCTGAG AATTAACAGC GCTAAAGATG ATGCTGCAGG TCTGGCAATC TCAAACCGTC TTAATTCGCA AGTACGTGGT CTTGAAGTGG GTATGCGTAA CGCTAACGAT GCTATCTCTA TCGCACAGAT CGCAGAAGGC GCGATGCAAG AGCAGACAAA CATGCTGCAG CGTATGCGTG ATTTGACTAT TCAGGCGGAG AACGGTGCTA ATAGTGTCGA TGATATTGCA GCGCTGAAAG CGGAAATGGA TCAGCTTGTC ACTGAAATTG ACTTGATCGG TACGAGTACA GCGTTTGGTA ATACTAAACT ATTAACCGGA GGCTTCTCTG CGGGGAAAAA CTTCCAGGTT GGTCATCAAG ATGGTGAAGA TATTAAAGTT ACCGTCAAGA AAACAGATAA AGCATCACTA TCTGTGAACG CAGTCGTCAT TGCTACTTCA GCTAACCGAG CTTCTGCCTT AGGTGCTATC GATAAAGCGA TTAAGACCAT CGATACCCAA CGTGCTGATT TAGGTGCGAT TCAAAATCGT GTAGCTCATA ATATCAGTAA CAGTGCTAAC ACTCAGGCTA ACGTCGCCGA TGCCAAGAGT CGTATTGTCG ATGTAGATTT CGCCAAAGAA ACTGCCACAA TGACTAAAAA TCAGGTTCTT CAACAGACTG GCTCTACTAT GCTTGCTCAG GCAAACCAAC TTCCTCAAGT TGCACTATCT TTACTCGGGT AA
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Protein sequence | MAITVNTNVT SLKAQKNLNV SSGALATSME RLSSGLRINS AKDDAAGLAI SNRLNSQVRG LEVGMRNAND AISIAQIAEG AMQEQTNMLQ RMRDLTIQAE NGANSVDDIA ALKAEMDQLV TEIDLIGTST AFGNTKLLTG GFSAGKNFQV GHQDGEDIKV TVKKTDKASL SVNAVVIATS ANRASALGAI DKAIKTIDTQ RADLGAIQNR VAHNISNSAN TQANVADAKS RIVDVDFAKE TATMTKNQVL QQTGSTMLAQ ANQLPQVALS LLG
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