| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3059 |
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| Symbol | fliM |
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| ID | 5612258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3694360 |
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| End bp | 3695385 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933996 |
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| Product | flagellar motor switch protein FliM |
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| Protein accession | YP_001474791 |
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| Protein GI | 157376191 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1868] Flagellar motor switch protein |
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| TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0661453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.103892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTGATC TATTAAGCCA AGACGAAATT GATGCGTTAC TGCATGGTGT AGATGACGTA
GAAGAAGATG AGGTAGACGA GGGGCTTGAT GCCCGCTCCT ATGACTTCTC TTCGCAAGAT
CGTATTGTCC GTGGACGTAT GCCTACGCTG GAGATCGTGA ATGAGCGTTT TGCTCGCCAT
TTACGGATCA GCATGTTCAA CATGATGCGC CGAGCCGCCG AAGTGTCCAT TAACGGTGTC
CAAATGCTTA AGTTTGGCGA ATATGTCCAT ACTCTATTTG TTCCTACCAG TCTCAATATG
GTGCGTTTTA GCCCCCTGAA AGGGACGGCA CTGATCACCA TGGAAGCAAG ATTAGTCTTT
ATCTTAGTGG ATAACTTTTT TGGTGGAGAT GGACGCTTTC ACGCTAAAAT TGAAGGTCGT
GAATTCACCC CAACTGAACG ACGTATCGTG CAGTTACTGC TAAAGATTAT CTTCGAAGAT
TATAAAGATG CCTGGGCACC TGTGATGGAT GTCGAGTTCG ATTATCTGGA CTCTGAGGTC
AACCCGGCTA TGGCTAATAT TGTTAGCCCT ACCGAAGTGG TTGTCGTCAG TTCATTCCAT
ATCGAAGTCG ATGGCGGGGG AGGGGATTTT CATATCACCA TGCCTTATTC AATGATTGAA
CCTATCCGTG AACTGCTTGA TGCCGGTGTA CAAAGTGACA CTCAAGATAC CGATATGCGT
TGGTCGCAGG CATTAAAGGA TGAGATTATG GATGTAGATG TAGGCATAGA TGCAACCATT
GTAGAGCATC AGGTTACGTT AAAAGATGTG ATGGAATTTA AACAAGGGGA CGTGATCACC
GTTGAATTGC CGGAACATAT CGTTATGAGG GTCGAAGATC TGCCGACTTA CCGATGCAAA
CTAGGTACTG CGCGTGATAA TTTAGCTTTG AGAATATGTG AAACCATTCC GAGACCGGAA
ACGGCTAAGA ATGAGCTGCA ACTGGTCACT CGCAAGGCGA AGGTCAGAGA AGCGAAAGAG
TTATAA
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| Protein sequence | MSDLLSQDEI DALLHGVDDV EEDEVDEGLD ARSYDFSSQD RIVRGRMPTL EIVNERFARH
LRISMFNMMR RAAEVSINGV QMLKFGEYVH TLFVPTSLNM VRFSPLKGTA LITMEARLVF
ILVDNFFGGD GRFHAKIEGR EFTPTERRIV QLLLKIIFED YKDAWAPVMD VEFDYLDSEV
NPAMANIVSP TEVVVVSSFH IEVDGGGGDF HITMPYSMIE PIRELLDAGV QSDTQDTDMR
WSQALKDEIM DVDVGIDATI VEHQVTLKDV MEFKQGDVIT VELPEHIVMR VEDLPTYRCK
LGTARDNLAL RICETIPRPE TAKNELQLVT RKAKVREAKE L
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