| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3058 |
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| Symbol | fliN |
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| ID | 5612045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3693871 |
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| End bp | 3694254 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933995 |
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| Product | flagellar motor switch protein |
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| Protein accession | YP_001474790 |
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| Protein GI | 157376190 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.173815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.141137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACTG AAGATACAGG TGATGATTGG GCTGAAGCGA TGGCAGAGCA GGCAATAGAA
GAGGCGCAGG CTGTCGAACT CGACGAGTTA ACCGATACCG CTGCGGCGCT TTCTGAAGAA
GATGTCGCCA AGCTCGATTC AATTATGGAT ATTCCTGTGA CTATCTCGAT GGAGGTGGGT
CGTAGTTTTA TCAGTATCCG GAATTTATTG CAGCTCAACC AAGGCTCAGT GGTCGAATTA
GATCGTGTCG CGGGGGAGCC GTTAGACGTG ATGGTCAACG GAACATTAAT CGCTCACGGA
GAGGTGGTTG TTGTGAACGA TAAATTTGGT ATTCGTTTGA CTGACGTGAT CAGCCAGACT
GAACGAATTA AAAAGCTTAA ATAA
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| Protein sequence | MSTEDTGDDW AEAMAEQAIE EAQAVELDEL TDTAAALSEE DVAKLDSIMD IPVTISMEVG
RSFISIRNLL QLNQGSVVEL DRVAGEPLDV MVNGTLIAHG EVVVVNDKFG IRLTDVISQT
ERIKKLK
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