| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3053 |
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| Symbol | flhB |
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| ID | 5612332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3690448 |
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| End bp | 3691581 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933990 |
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| Product | flagellar biosynthesis protein FlhB |
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| Protein accession | YP_001474785 |
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| Protein GI | 157376185 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | [TIGR00328] flagellar biosynthetic protein FlhB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0535555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAGA ACGACAGCAG TCAAGAGAAA ACCGAGGAGG CGACCCCCAG GCGCCGGGAG
CAATCCCGGG AGAAAGGTCA GGTTGCTCGC TCGAAGGAGT TAGGAACTTC AGCTGTCTTG
ATGGCTGCCG CTGTCGGTTT CGCTATGACT GGGCCAAGTA TAGCCAAGGC TCTCTATAAT
ATTATGGAGA TGCTCTTTAC CCTGGACAGA ACGCAGATCT TTGATACCAA TGCGTTGTTT
TTAATCTGGC CTGTCATAGG TCAGCAGCTC GCATTCCCTA TGCTGAGCTT TATTGCAATA
CTCACCCTTA TGGCATTCTT GGGCAATATT GTCCTTGGCG GTATCACCTT CTCCACTAAG
GCATTTATGC CTAAAACAGA TAAGATGAAT CCGATCAATG GTTTCAAACG AATGTTTGGT
GTTCAAGCGC TCGTCGAATT GACCAAAGGT ATCGCAAAAT TTTCGGTAGT CGCATTATCA
GCCTATTTTC TTCTAAGCTA CTATTTTAAT GATATTCTGG CACTCTCACG GGATCACCTC
CCCGGCAACG TTTACCATGC ATTAGATCTC CTGATCTGGA TGTTCATTAT TCTCTGCTCC
TCCACAATAA TTATTGTCGT TATCGATGTT CCATTTCAAA TCTGGAACCA CAACAAGCAG
CTGAAGATGA CGAAGCAGGA GATAAAAGAT GAATATAAAG ATACCGAAGG TAAGCCGGAA
GTTAAGGGCA AAGTAAGGCA GATGCAAAGA GAGATGGCGC AACGCCGCAT GATGGGCGAA
GTACCTAATG CCGATGTGAT TGTGGTCAAT CCGGACCATT ATGCCGTTGC GGTTAAGTAT
GATGCCATGA AAGCCACGGC TCCCTTTGTT TTGGCAAAAG GCGTCGATGA AGTGGCATTC
AAGATTAGGG AGATAGCGCG AGAACATGAG ATTGCCATCG TCTCAGCCCC ACCTCTGGCG
CGTGCTATAT ACCATACAAC TAAGATCGAT CAGGAAATTC CCGAAGGACT TTTCACTGCG
GTAGCTCAGG TGCTCGCTTA CGTATTTCAG CTTCGTCAAT TTCAAAAACA TGGTGGTAAA
CGACCCAATC CAATTCCAAG TGAACAACCT ATCCCTGATG AACTTAAACA TTAA
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| Protein sequence | MAENDSSQEK TEEATPRRRE QSREKGQVAR SKELGTSAVL MAAAVGFAMT GPSIAKALYN
IMEMLFTLDR TQIFDTNALF LIWPVIGQQL AFPMLSFIAI LTLMAFLGNI VLGGITFSTK
AFMPKTDKMN PINGFKRMFG VQALVELTKG IAKFSVVALS AYFLLSYYFN DILALSRDHL
PGNVYHALDL LIWMFIILCS STIIIVVIDV PFQIWNHNKQ LKMTKQEIKD EYKDTEGKPE
VKGKVRQMQR EMAQRRMMGE VPNADVIVVN PDHYAVAVKY DAMKATAPFV LAKGVDEVAF
KIREIAREHE IAIVSAPPLA RAIYHTTKID QEIPEGLFTA VAQVLAYVFQ LRQFQKHGGK
RPNPIPSEQP IPDELKH
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